FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804621

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804621
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170723
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT164199.617333341143256No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG131027.674419966846881No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA109876.435571071267492No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG90585.305670589200049No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA85375.000497882534867No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG77814.557675298583084No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA75984.450484117547138No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG74034.336264006607194No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT72124.224386872301916No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT63323.708932012675504No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG48602.8467166111185955No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACACTATGGCTTAATGTTTCT34121.9985590693696806No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT33001.9329557235990464No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT30351.7777335215524561No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA24351.4262870263526297No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA17491.0244665335074945No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG14680.8598724249222425No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT12030.7046502228756524No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG11850.6941068280196576No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC11230.6577906901823422No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA10680.6255747614556914No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC9820.5752007638103829No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT9420.5517709974637278No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG9200.5388846259730674No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG9180.5377131376557347No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC9070.5312699519104046No Hit
CATAGACACAACGTTTGAGACTGCCTCCTCAAGTGGGTCCCTGACCTCCA8510.4984682790250874No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGTGCCATACCAAGAAT8220.4814816984237625No Hit
CATAGAACCAACCCTGATTCTGCTGGTCCTGTGTGGCCAACAGGAAGGTC7640.44750853722111256No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG6500.3807337031331455No Hit
CATAGAGCCATCATCATTTCTCACCCAGGTAAACAAACTTCTGGCCCTCT6440.3772192381811472No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA6250.3660900991664861No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC6000.3514464951998266No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACTATGGCTTAATGTT5940.34793203024782837No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG5820.3409031003438318No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT5730.33563140291583443No Hit
CATAGATCCAGCTTCATCCATGTCCCAGGAAAGTTGGAACCTATCAGTGT5660.3315311938051698No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA5640.330359705487837No Hit
CATAGATTTCTGTACCTCACTGCCGAGGTTTCCTGGGCATCAAGTCTATG5310.31103014825184655No Hit
CATAGACTCACTCTGTCACCCAAGCTATCTGTGACACCGAAAAACACCCT5290.30985865993451384No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC5230.3063441949825155No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCAGGAAAGTTGGAACCT5150.3016582417131845No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTACGGTAGCAGAAGCTTTG5130.30048675339585174No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT4690.27471401041453114No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC4640.27178528962119924No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGAGGTTTCCTGGGCAT4470.26182763892387084No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA4380.2565559414958734No Hit
CATAGACAAGCCTGCCAAGACCTCTCGTCAGTGTAGAGGCAAGGGTACTA4100.24015510505321483No Hit
CATAGATCCAGCTTCATCCATGTCCCTTTCAGAGGCAAGGGTACTATTTT4080.23898361673588212No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACCCCATATCTACCAAAGA4050.23722638425988296No Hit
CATAGACGGGAAGAGTAAGACCACCCAATTACCTTTCACGTAAGCAGATG3680.21555385038922698No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG3540.2073534321678977No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTACTATGGCTTAATGTTTCT3450.20208173473990032No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT3380.19798152562923566No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGGCCATTGTCGCCTTCTC3190.18685238661457448No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTTCCCCAATATGAACAG2800.16400836442658576No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGAAGCTTTGAGATTTGTGTCTGTT2780.162836876109253No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC2670.15639369036392284No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG2660.15580794620525645No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT2590.15170773709459182No Hit
CATAGACTCACTCTGTCACCCAAGCTCTTGGTCTCATAGAGGCAAGGGTA2570.15053624877725907No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG2550.1493647604599263No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC2490.14585029550792805No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2430.1423358305559298No Hit
CATAGACACAACGTTTGAGACTGCCTGTGCAAAATTCTCTTGACATAGTT2360.13823562144526513No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA2340.13706413312793236No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCTACCAAAAGCACAAGGGAGAA2230.13062094738260221No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTTGGTCTCCTCCGATGCTTATTA2030.11890606420927466No Hit
CATAGATAGCAGCAATCTCAGGCCTCGTTCTATGTGTAGAACCATGTCGT2020.1183203200506083No Hit
CATAGAACAATCAGGCACCCACCATGGTGGGAGTATACTGATAGCTCTAT2010.11773457589194193No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTGCAAAATTCTCTTGACA1930.1130486226226109No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCTTCTTCCTCCTCCTGTCTATG1880.110119901829279No Hit
CATAGAGGAAAGAACAACTGCGGACGAGACTTGGTCTCATAGAGGCAAGG1840.10777692519461349No Hit
CATAGAAAGGGACAAGGGCTCACTCTTCTGCTGCTCACTCTTTGGGTTCT1800.10543394855994799No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCGGCGCAGAGCCTTCAGGTCA1770.10367671608394885No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT1760.10309097192528248No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCGTGGTGTGCAAATTCT1710.10016225113195058No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)