FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110867
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3786834.15624126205273No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC70746.3806182182254405No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT31062.8015550163709673No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA31042.7997510530635807No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT27342.46601784119711No Hit
CNTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG22942.069145913572118No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA22171.9996933262377443No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA15171.3683061686525297No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG14321.2916377280886107No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA14271.2871278198201448No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT12651.1410067919218523No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA12201.10041761750566No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA10120.9128054335374818No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG6860.6187594144335105No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT6160.555620698674989No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT5910.5330711573326599No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC5780.5213453958346487No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT4960.4473829002318093No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT4930.4446769552707298No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG4740.4275393038505597No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT4610.4158135423525486No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC4570.4122056157377759No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG3970.35808671651618607No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT3610.3256153769832322No Hit
CNTAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC3550.32020348706107316No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG3290.29675196406505094No Hit
CATAGATGTCCATCATGTGGAAGCTGACTGATACAGGAAGGCCTTTCTAT3250.2931440374502782No Hit
CATAGATTGGAACTTTGCCAGCCTTAACACTGACTGATACAGGAAGGCCT3020.2723984594153355No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC2650.23902513822868843No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA2620.23631919326760892No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC2570.23180928499914313No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA2500.22549541342329094No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA2490.2245934317695978No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA2460.22188748680851833No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG2360.21286767027158668No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT2230.20114190877357552No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2180.19663200050510973No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG2050.1849062390070986No Hit
CATAGAGGATCCCATCTGAGTTGGTCAGTGTATTGACCCAGGTCCCCAAA1980.17859236743124643No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1970.1776903857775533No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1930.17408245916278065No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1910.17227849585539431No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG1890.17047453254800796No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1880.1695725508943148No Hit
CNTAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT1810.16325867931846266No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGGTTCTA1800.16235669766476948No Hit
CATAGATGCCCTTTTTGTGTACTTCCACGACATGGTTCTACACAAAGTCA1750.15784678939630367No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1740.15694480774261052No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT1700.15333688112783786No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1700.15333688112783786No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA1690.1524348994741447No Hit
CNTAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT1570.14161111962982673No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGCTTTGGACCTGCG1520.13710121136136091No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGCCCTGCG1510.13619922970766776No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1510.13619922970766776No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACTGATACAGGAAGGCCTTT1500.13529724805397458No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1470.1325913030928951No Hit
CNTAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA1450.13078733978550877No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG1390.12537544986334978No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTT1380.12447346820965663No Hit
CATAGACAGGGAGGCGTATAAGTGATGGTAGCAGAATTACCTCTGGATGG1360.12266950490227028No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCCGATTTGGACCTGCG1330.1199635599411908No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA1310.11815959663380446No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1210.10913978009687282No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC1210.10913978009687282No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA1200.10823779844317967No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1200.10823779844317967No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1150.10372789017471386No Hit
CNTAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA1150.10372789017471386No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT1120.10102194521363435No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1110.1001199635599412No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)