FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences219196
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC109605.000091242540923No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA91964.195332031606417No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC82853.7797222577054326No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA79893.6446832971404586No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA54302.4772349860398912No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT53402.4361758426248654No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA52032.373674702093104No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA51642.3558824066132593No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA46232.109071333418493No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA35941.6396284603733644No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG33241.516451030128287No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT30771.4037664920892716No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA22761.0383401156955419No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA21150.9648898702531068No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG21040.9598715305023814No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT20960.9562218288654902No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC20580.9388857460902572No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG19480.8887023485830033No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC18830.8590485227832625No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG18720.8540301830325371No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC18400.8394313764849723No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT18190.829850909688133No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA18180.8293946969835215No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA18020.8220952937097393No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA17650.8052154236391175No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT15080.6879687585539882No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT14870.6783882917571488No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT14730.6720013138925893No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG14630.6674391868464753No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC14570.6647019106188069No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT13200.6022007700870454No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC13080.5967262176317086No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC13060.5958137922224858No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC12720.5803025602656984No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT12620.5757404332195842No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGAATTAGAGCCAGTTCTGAGT11090.5059398894140403No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG10960.5000091242540922No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTCCAACTCTATAGATTATGCT10930.498640486140258No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG10720.48906001934341864No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC10630.48495410500191616No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG10540.4808481906604135No Hit
CATAGACCATGTAATACCATCGTGAGCAGGAAAATGTCAGTGGGCCATCT10540.4808481906604135No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA9590.4375079837223307No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG9360.42701509151626854No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC9090.41469734849176076No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAAGGATGACTTATGGA9020.411503859559481No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG8950.40831037062720127No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCTACCACAATGGGCACACTTAAC8520.3886932243289111No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT8520.3886932243289111No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA8520.3886932243289111No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG8410.3836748845781857No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT8330.38002518294129456No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT8160.3722695669629008No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT8130.3709009288490666No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA8100.3695322907352324No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT7970.36360152557528425No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA7890.35995182393839303No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTCTCAAGGTTTT7730.35265242066461067No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACCCGTAATCCCTCCCTTTTCTA7400.33759740141243455No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA7400.33759740141243455No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT7200.32847314732020655No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT7170.32710450920637235No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT6870.31341812806803043No Hit
CATAGATGCACCAGAAGCCACCTACCGTACAATGGGCACACTTAACACCT6780.30931221372652784No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG6660.3038376612711911No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA6560.2992755342250771No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCGATGATCTAGCTTCGGAATGTT6480.2956258325881859No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC6210.28330808956367814No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAAAATGTCAGTGGGCCAT6210.28330808956367814No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGACACTGATCTAGCTTCGGA6140.28011460063139837No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA6110.2787459625175642No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT6090.27783353710834136No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTGGTGGTGCTGGAACTAGTTCT5910.2696217084253362No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5900.26916549572072485No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGATGACTTATGGAATCTG5890.2687092830161134No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT5840.26642821949305645No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5720.26095366703771966No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTTCTCTGATACCATCCCTCTATG5710.2604974543331083No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5660.25821639081005127No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGCCTTCTCTGATACCATC5580.2545666891731601No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGCCAAGATTGTAGGAGTAGA5380.24544243508093214No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTCTCTTCCGCCTTTATCCTTCTAT5350.24407379696709794No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG5150.23494954287486997No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT5130.2340371174656472No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA5110.23312469205642436No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAATGGGCACACTTAACACCTC4950.22582528878264202No Hit
CATAGATTTGGCACTCACATACACGCCTACACAATGGGCACACTTAACAC4830.22035073632730523No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC4770.21761346009963686No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCTGAGTCACTCAAATATAGACCTCA4730.21578860928119126No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTAAGGAAAATGTCAGTGGGCCATC4660.21259512034891148No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGGTGAAAAGTAGGGGACAGT4570.2084892060074089No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA4560.20803299330279748No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT4530.20666435518896328No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAAGCACATTATTATT4510.2057519297797405No Hit
CATAGAAAAGTCACCATGCAGCCCTGATCTAGCTTCGGAATGTTTTCATC4480.2043832916659063No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGATGACTTATGGAATCTGAAG4430.20210222814284934No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4390.2002773773244037No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGCTGGTGGTGCTGGAACTAGTTC4360.1989087392105695No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG4300.19617146298290117No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAAGGGCAAGTGTATGGTCAGTT4210.19206554864139858No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGATGACTTATGGAATCTGAA4170.19024069782295297No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4140.1888720597091188No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA4070.185678570776839No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA4000.18248508184455922No Hit
CATAGAGCATCCTCGTAATAGCAAACATTACGCTGACATCCCAACCACAC3930.17929159291227942No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA3930.17929159291227942No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT3900.17792295479844522No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCACACTGACGACAATGGGCACAC3850.17564189127538823No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG3780.17244840234310843No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTAGAACAAGGGCATGGTCAAGTG3760.17153597693388567No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG3740.17062355152466285No Hit
CATAGAATTCCCCAATGTCCTGTGCAACACTGACGACAATGGGCACACTT3700.16879870070621728No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG3600.16423657366010327No Hit
CATAGATGTGTGAGAGAGGGAGAGACAATGGGCACACTTAACACCTCTAT3580.16332414825088049No Hit
CATAGAGCATCCTCGTAATAGCAAACATTCCAACTCTATAGATTATGCTC3520.1605868720232121No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT3500.15967444661398933No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3490.1592182339093779No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTATCCATCAGAGCATCACC3490.1592182339093779No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGAATTAGAGCCAGTTCTGA3460.1578495957955437No Hit
CATAGAGACCCCCAAGTAGCCTAACTGACGCTGACATCCCAACCACACGT3430.15648095768170953No Hit
CATAGATCATGGGACTTCAGCATGGCTGTGCCCTGTGATTGTCCTGGTCT3340.15237504334020693No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACTTTGTTCCCTGGCTTCTCT3320.15146261793098414No Hit
CATAGAGCATCCTCGTAATAGCAAACATTAGCCAGAGGATGACTTATGGA3260.14872534170331575No Hit
CATAGATGGCATGTCACTTCCTCAGAGAAGGGCAAGTGTATGGTCAGTTC3220.14690049088487017No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAATTAGAGCCAGTTCTG3180.1450756400664246No Hit
CATAGACAGTCCTGCCGTGTACATGTACACTGACGACATGGTTGTACAAA3160.14416321465720178No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG3160.14416321465720178No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCCCTTCATTTTGCTGG3100.14142593842953338No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGCCCTGTGATTGTCCTGGTCTAT3070.14005730031569918No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA3020.1377762367926422No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA3010.13732002408803082No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCTGGCAAAAGGGTAAG3010.13732002408803082No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG2910.13275789704191682No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC2860.13047683351885983No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT2810.12819576999580284No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCGTAACTCCAGTCTCGG2800.12773955729119144No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT2650.12089636672202048No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2470.11268453803901532No Hit
CATAGAATTGCCTACTTTGGGACCCACAGCCCAGTTTTCCTTCTCTATGA2460.11222832533440391No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2390.10903483640212412No Hit
CATAGATGCACCAGAAGCCACCTACCCACATAGAAGGGCAAGTGTATGGT2360.10766619828828992No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTGGTGGTGCTGGAACTAG2330.10629756017445574No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATATGGTGAAAAGTAGGGGAC2280.10401649665139874No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)