FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804643

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804643
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences219196
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG112205.118706545739886No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT92144.203543860289422No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT79963.6478767860727386No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG78573.584463220131754No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT53292.43115750287414No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT52802.4088030803481817No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT51692.3581634701363163No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT50242.2920126279676634No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT46692.130057117830617No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT36181.650577565284038No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT35061.5994817423675614No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG33441.525575284220515No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC22961.04746436978777No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT21240.9689957845946093No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT20980.957134254274713No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG20950.9557656161608789No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG20510.9356922571579773No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG19300.8804905198999982No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC18810.8581360973740397No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG18240.8321319732111899No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT18180.8293946969835215No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT17980.8202704428912936No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT17650.8052154236391175No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT17080.7792112994762678No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT15200.693443311009325No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT14750.6729137393018121No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC14570.6647019106188069No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC14480.6605959962773044No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC14450.6592273581634701No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG14180.6469096151389624No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT13230.6035694082008796No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC12840.585777112721035No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12640.5766528586288071No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT12620.5757404332195842No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA12400.5657037537181335No Hit
CATAGACTCAGAACTGGCTCTAATTCCTGGATCTCAGAGTTAGCTTGCCT11000.5018339750725378No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAAGCAGCAAACAATTTCAG10940.49909669884486946No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC10870.4959032099125896No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC10830.49407835909414405No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG10690.48769138122958444No Hit
CATAGATGGCCCACTGACATTTTCCTGCTCACGATGGTATTACATGGTCT10340.4717239365681855No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG10220.4662493841128487No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC9400.4288399423347141No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC9330.42564645340243434No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG9120.41606598660559496No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTAGCATTCTTTCTCC9040.41241628496870386No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG8950.40831037062720127No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT8710.3973612657165277No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG8320.3795689702366831No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT8260.37683169400901473No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGTAGCAGTTAGGCTACTTGGGG8230.37546305589518053No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT8220.3750068431905692No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT8060.3677074399167868No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA7980.3640577382798956No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7940.36223288746145005No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT7930.3617766747568386No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT7820.35675833500611326No Hit
CATAGAACCTCAAGCCGGAAAACCTTGAGACTTGGTCTCATAGAACTTTC7650.34900271902771945No Hit
CATAGAAAAGGGAGGGATTACGGGTGGATCTCAGAGTTAGCTTGCCTCTA7360.33577255059398897No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGCAGTTAGGCTACTTGGG7340.33486012518476616No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT7160.32664829650176097No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT6740.30748736290808226No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTAGGTGGCTTCTGGTGCAT6710.30611872479424806No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT6700.3056625120896367No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG6640.3029252358619683No Hit
CATAGATGAAAACATTCCGAAGCTAGATCATCGCATTCTTTCTCCAGACC6530.2979068961112429No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT6470.29516961988357454No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC6200.28285187685906676No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTTTTACAAACTCAAGTGATT6180.281939451449844No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTCAAGAAAGAAAACCCA6100.2782897498129528No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG6090.27783353710834136No Hit
CATAGAACTAGTTCCAGCACCACCAGCATTCTTTCTCCAGACCTTCATCT5980.272815197357616No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTTGCAGGATGAATGGG5840.26642821949305645No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT5820.26551579408383363No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT5740.2618660924469425No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAACTTCGCCTGCCTTTCTCTATG5700.26004124162849684No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC5680.2591288162192741No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5470.24954834942243473No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTTGCAGGATGAATGGGGA5440.24817971130860053No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTAACTTCGCCTGCCTTTCTCTAT5440.24817971130860053No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC5430.24772349860398912No Hit
CATAGATCTACTCCTACAATCTTGGCAAATGTTTGCTATTACGAGGATGC5360.24453000967170932No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC5130.2340371174656472No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5070.2312998412379788No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGATCTCAGAGTTAGCTTGCCTC4910.22400043796419644No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA4790.21852588550885965No Hit
CATAGATGGCCCACTGACATTTTCCTTAGAACTTTCCCACCGCCCTTTTC4750.21670103469041405No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGTAGGCGTGTATGTGAGTGCCAA4720.21533239657657985No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTCAGCTAACTTCGCCTGCCT4650.21213890764430007No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGAAAGAAAACCCACAAAAGACG4650.21213890764430007No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGGGCTGCATGGTGACTTTTC4630.21122648223507728No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA4610.21031405682585447No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4550.20757678059818613No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGAACGAAATTTAGGT4530.20666435518896328No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT4520.20620814248435193No Hit
CATAGAACTAGTTCCAGCACCACCAGCCAGTTAGGCTACTTGGGGGTCTC4440.20255844084746075No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG4280.19525903757367835No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGGATCTCAGAGTTAGCTTGC4280.19525903757367835No Hit
CATAGAACTGACCATACACTTGCCCTTCTTGTCCCCTATTACTGAAAGTT4200.19160933593678717No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGGTGGCTTCTGGTG4100.18704720889067317No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA4080.1861347834814504No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3950.1802040183215022No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG3950.1802040183215022No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA3940.17974780561689083No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT3940.17974780561689083No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGCATTCTTTCTCCA3880.17701052938922243No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTAATGTTTGCTATTACGAGGATG3850.17564189127538823No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC3720.16971112611544006No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG3710.16925491341082866No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTTGCACAGGACATTG3670.16743006259238308No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA3660.16697384988777167No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCCTCTTCACCTCCCAGATCTATG3590.1637803609554919No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGTTTGCTATTACGAGGA3480.1587620212047665No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT3440.15693717038632093No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3440.15693717038632093No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGCAGCTCCTCTTCTCTT3430.15648095768170953No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCTCCCTCTCTCACACATCTAT3410.15556853227248674No Hit
CATAGACTCAGAACTGGCTCTAATTCCTTACGGTAGGTGGCTTCTGGTGC3390.15465610686326392No Hit
CATAGACCAGGACAATCACAGGGCACAGCCATGCTGAAGTCCCATGATCT3320.15146261793098414No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTAGAATCTTGAACTCAGGAGTCT3310.15100640522637274No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTCAGTTAGGCTACTTGGGGGTCT3290.15009397981714995No Hit
CATAGAACTGACCATACACTTGCCCTTCTCTGAGGAAGTGACATGCCATC3250.14826912899870437No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTGGCTAATGTTTGCTATTA3230.14735670358948155No Hit
CATAGACTCAGAACTGGCTCTAATTCCTACGGTTGCAGGATGAATGGGGA3150.1437070019525904No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA3150.1437070019525904No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAACCATGTCGTCAGTGTACATG3120.1423383638387562No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT3090.140969725724922No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTACGGTAGCAGCTCCTCTTCTCTT3080.1405135130203106No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC3050.1391448749064764No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTAGCAGCTCCTCTTCTCTT3030.1382324494972536No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2920.13321410974652823No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG2880.13138925892808262No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT2850.13002062081424842No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG2810.12819576999580284No Hit
CATAGACTTGTTGCCGAGACTGGAGTTACGGTAGCAGACACTTGAAAGCT2730.12454606835891166No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2680.12226500483585466No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2520.1149656015620723No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCCCAAAGTAGGCAATTCTATGT2410.10994726181134692No Hit
CATAGAACTGTCCCCTACTTTTCACCATATCCCAGTTAGGCTACTTGGGG2330.10629756017445574No Hit
CATAGAACTGACCATACACTTGCCCTTCTATGTGGGTAGGTGGCTTCTGG2310.10538513476523294No Hit
CATAGAACTAGTTCCAGCACCACCAGATCTGCTCACGATGGTATTACATG2230.10173543312834177No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)