FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804645

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804645
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences211663
Sequences flagged as poor quality0
Sequence length150
%GC34

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG112965.336785361636186No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT92274.3592881136523625No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT79013.7328205685452818No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG77753.673291978286238No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT66003.118164251664202No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT57942.7373702536579376No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT54052.5535875424613654No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT53372.521461001686643No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT48232.278622149360068No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG39411.8619220175467608No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT37761.7839679112551556No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG26141.2349820233106399No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG25571.2080524229553584No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT24541.1593901626642351No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC23301.1008064706632714No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG21911.035136041726707No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT21651.0228523643716663No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT21551.018127873081266No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT20200.954347240660862No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT19720.9316696824669404No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT17760.8390696531750943No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC17750.8385972040460543No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT16330.77150942772237No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC15950.7535563608188489No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT15600.7370206413024477No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC14520.6859961353661245No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT14240.6727675597530036No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT13930.6581216367527626No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG13630.6439481628815618No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13440.6349716294298011No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTGATTTAGGAAGCAGGGTTCTAT13290.6278848924942007No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG12190.5759154882997973No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11810.5579624213962762No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC11460.5414267018798751No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA11120.5253634314925141No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT10990.5192215928149936No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG10680.5045756698147527No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC10590.5003236276533924No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT9900.4677246377496303No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9570.45213381649130935No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG9540.4507164691041892No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT9430.44551952868474887No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG9180.4337083004587481No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT9090.4294562582973878No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA8600.40630625097442635No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGAAAGAAAACCCACAAAAGAC8550.4039440053292262No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT8440.39874706490978584No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC8160.385518489296665No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT8110.38315624365146483No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTGGTCTCATAGAACTTTCCCAC8070.3812664471353047No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACCTGTGTGTGTAAGTGGGTCTAT7920.37417971019970425No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC7530.35575419416714305No Hit
CATAGAGGCCATTCTTCTCATGCTGGTAGGTGGCTTCTGGTGCATCTATG7340.34677766071538246No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCTGCTTTTACAAACTCAAGT7250.3425256185540222No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG7230.3415807202959421No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTCTGCTTTTACAAACTCAAG7180.339218474650742No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT7160.3382735763926619No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTGTCTCATAGATGTGGTTGC7150.3378011272636219No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT6760.3193756112310607No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAATGTTTGCTATTA6600.3118164251664202No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT6580.31087152690834013No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT6380.3014225443275395No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6370.3009500951984995No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCTGCTTTTACAAACTCAAGTGA6340.2995327478113794No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT6250.2952807056500191No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGCAGAGTGGGAGTCAT6190.29244601087577893No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC6180.29197356174673894No Hit
CATAGACAATTTCAGTGCGGCCGATGCACAGGACATTGGGGAATTCTATG6060.28630417219825854No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTAGGTGGCTTCTGGTGCAT6030.2848868248111385No Hit
CATAGAACCTCAAGCCGGAAAACCTTACACTGCTCACGATGGTATTACAT5950.2811072317788182No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG5850.27638274048841793No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT5780.2730755965851377No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT5300.2503980383912162No Hit
CATAGAGGCCATTCTTCTCATGCTGGCATTCTTTCTCCAGACCTTCATCT5260.2485082418750561No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC5200.24567354710081593No Hit
CATAGAACTAGTTCCAGCACCACCAGTATCCCAGTTAGGCTACTTGGGGG4990.23575211539097526No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4970.2348072171328952No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA4910.231972522358655No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4700.2220510906488144No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTATCTTCTGCTGCACTGCTCTAT4590.21685415022937404No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT4550.21496435371321393No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC4490.21212965893897376No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4400.20787761677761346No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4280.20220822722913312No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGCTCACGATGGTATTACATG4220.19937353245489292No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC4210.19890108332585288No Hit
CATAGAACTGTCCCCTACTTTTCACCATGTCGGTAGGTGGCTTCTGGTGC4070.19228679551929245No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGCATTCTTTCTCCA4060.1918143463902524No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT4050.1913418972612124No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4040.19086944813217235No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCCCAGTTAGGCTACTTGGGGGT4020.1899245498740923No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT3990.18850720248697223No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGTCTCTCCCTCTCTC3980.18803475335793218No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTTTGCCAAGTAAGTCT3940.18614495684177207No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG3820.1804755672932917No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG3780.17858577077713159No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3760.17764087251905153No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTGTCCTCTTCACCTCCCAGA3730.1762235251319314No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACGGTTGCAGGATGAATGGGGACA3720.1757510760028914No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3660.17291638122865122No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA3320.15685311084129017No Hit
CATAGACTTGTTGCCGAGACTGGAGTCTTGTTGCAGGATGAATGGGGACA3300.1559082125832101No Hit
CATAGAACTGACCATACACTTGCCCTTCCAGTTAGGCTACTTGGGGGTCT3220.15212861955088985No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGGTGGCTTCTGGTGCA3170.1497663739056897No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTGAACGAAATTTAGGTGAG3170.1497663739056897No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTGCTTTTACAAACTCAAG3130.14787657738952958No Hit
CATAGAACTCTTACCCTTTTGCCAGGCTTGTCTCTCCCTCTCTCACACAT3110.14693167913144953No Hit
CATAGAGGCCATTCTTCTCATGCTGGTTCTGTCCTCTTCACCTCCCAGAT3100.1464592300024095No Hit
CATAGATGAGGGATGTAGGCTGTACACTGTCTGGCACAATGAGGCAATCT3060.14456943348624937No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT3040.14362453522816931No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAAAGCAGCAAACAATTTCAG2940.138900043937769No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2790.13181330700216853No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG2780.13134085787312852No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACGGTAGCAGACACTTGAA2750.12992351048600842No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2740.12945106135696838No Hit
CATAGATCCATGGTGTGCAAGGACAAGAAAGAAAACCCACAAAAGACGTC2730.12897861222792836No Hit
CATAGAACTGACCATACACTTGCCCTGGGACACTTGAAAGCTCCCTGGAT2720.12850616309888832No Hit
CATAGACACTTGACCATGCCCTTGTTGATTTAGGAAGCAGGGTTCTATGT2710.12803371396984828No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGATCTCAGAGTTAGCTTGCCTC2690.12708881571176822No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGGTCTCATAGACAGGGGTGTGGTG2660.12567146832464815No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACCTGACGAGCCGTTTCCC2640.1247265700665681No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGACAGGGGTGTGGT2620.12378167180848802No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT2590.12236432442136794No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGTGCACAGTTTGGAATGACTCTA2590.12236432442136794No Hit
CATAGAACTCTTACCCTTTTGCCAGGGACATGTCTCTCCCTCTCTCACAC2510.11858473138904768No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2470.11669493487288757No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2470.11669493487288757No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAACACTGAACGAAATTTAGGTGA2450.11575003661480751No Hit
CATAGACCAGGACAATCACAGGGCACTACGGTTGCAGGATGAATGGGGAC2410.11386024009864737No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2410.11386024009864737No Hit
CATAGAACATCTCCCTGTTCCTCCCATAGACACTTGAAAGCTCCCTGGAT2390.11291534184056731No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2340.11055309619536716No Hit
CATAGAACTGACCATACACTTGCCCTGGGTAGAATCTTGAACTCAGGAGT2300.10866329967920704No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC2270.10724595229208696No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTAGACAGGGGTGTGGTGTTCTGT2250.10630105403400687No Hit
CATAGACACTTGACCATGCCCTTGTTCCTTGGTCTCATAGACACTTGAAA2220.10488370664688679No Hit
CATAGACTCAGAACTGGCTCTAATTCCTCCCTCTACCAGCCTCAGTTCTA2190.1034663592597667No Hit
CATAGAACTAGTTCCAGCACCACCAGCATTCTTTCTCCAGACCTTCATCT2160.10204901187264662No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTTGCAGGATGAATGGGGAC2150.10157656274360659No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATGCCAAGTAAGTCTACAAAGAA2140.10110411361456656No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2130.10063166448552653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)