FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences173077
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA140348.108529729542342No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT110386.377508276662988No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG97645.641419714924571No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA86685.008175551921977No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA68633.965287126539055No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG61703.5648873044945315No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA35022.0233768784991653No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT32721.8904880486719784No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA29721.717154792375648No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG27151.5686659694817913No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA23811.3756882774718766No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA22821.3184883028940875No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC22711.3121327501632223No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT20021.1567105970175124No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT19191.1087550627755276No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT18091.045199535466873No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG16900.9764440104693286No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT15490.8949773800100533No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA14840.8574218411458483No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC14770.853377398498934No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG13250.7655552153087931No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG12930.7470663346371846No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT12810.7401330043853314No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA12600.7279996764445883No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT11660.6736885894717379No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA11290.6523108211951906No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT10640.6147552823309856No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT10060.5812441861136951No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA9510.5494664224593677No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT9240.5338664293926981No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC8860.5119108835951628No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA8710.5032442207803464No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATAACTTAGCAACCTGTACA8090.4674220144791047No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCATAGAATTTGCAAATACAG7210.4165775926321811No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT7180.41484426006921776No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG7130.41195537246427893No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT7080.40906648485934005No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG6660.3847998289778538No Hit
CATAGATGTGCCACATACCTTTCCCAGAATTTGCAAATACAGAATCAGTG6420.3709331684741473No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT6150.3553331754074776No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG6100.3524442878025388No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG5740.3316442970469791No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT5530.31951096910623594No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA5490.3171998590222849No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA5320.3073776411654928No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCGAGGCAGAGGACAGGTATCT5000.28888876049388423No Hit
CATAGAATACAACACACTCTCTGCCCTGCAGCAACAAAAGTCACTCCTCT4860.28079987520005545No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTAATGGAGGAGTATGGGATCT4730.2732887674272145No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG4730.2732887674272145No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG4630.26751099221733676No Hit
CATAGACCTGTGTGTGAGGCATTGTTCCTTGGAGAGAAATGCTGCTCTAT4590.26519988213338574No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA4470.25826655188153247No Hit
CATAGATGATCCATCTACCTCTGCTTCAGAATTTGCAAATACAGAATCAG4380.25306655419264257No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA4260.24613322394078938No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG4140.23919989368893615No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA4090.2363110060839973No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA4070.23515545104202173No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG3920.22648878822720525No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA3700.21377768276547435No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC3670.21204435020251103No Hit
CATAGACCTGTGTGTGAGGCATTGTTTACGGAGATAGAGAGGTTGGTTCT3640.21031101763954774No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACATAGAACATTAGCTTAGTT3520.2033776873876945No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC3470.20048879978275566No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT3470.20048879978275566No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3450.19933324474078012No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3430.19817768969880456No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA3390.19586657961485351No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG3340.19297769200991466No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT3270.1889332493630003No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG3180.18373325167411036No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG3150.18199991911114707No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3130.18084436406917154No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG3010.17391103381731832No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC2980.172177701254355No Hit
CATAGATGCTTCTGATATGTTGCCGTACAGGTGCAAATTGTCAGTGTGTC2780.16062215083459963No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACATGTGTGAGAGGGAAGGAC2650.15311104306175863No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAGACCAAAGCTAGAAACT2640.15253326554077087No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT2600.1502221554568198No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2550.14733326785188097No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2520.14559993528891765No Hit
CATAGAGAACAGCCCTGAGAGAATGCTATTGGGGATGGCTGGTTGAATCT2520.14559993528891765No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2470.1427110476839788No Hit
CATAGAAGTGACCCTCAGCTCAGTGACGGAGATAGAGAGGTTGGTTCTAT2400.13866660503706443No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAACAGTGAAACAAGATCGTGC2400.13866660503706443No Hit
CATAGATGCTTCTGATATGTTGCCGTACATGTGTGAGAGGGAAGGACTCT2380.1375110499950889No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2270.13115549726422346No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTACATGTGTGAGAGGGAA2260.13057771974323568No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAGAACAGCTAAAAATCTTG2250.1299999422222479No Hit
CATAGATGTGGTCTCAGTGCCCTATGGTAGCACAACTGGCATCTGGTGAT2230.12884438718027236No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCACATAGAACAGCTAAAAATCTTG2230.12884438718027236No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGAGAGGAGGGGGCAGAATATC2200.12711105461730907No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA2200.12711105461730907No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAATTAACTTAGCAACCTGTACA2180.12595549957533353No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA2130.12306661197039469No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGAACATTAGCTTAGTTAATT2120.1224888344494069No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2120.1224888344494069No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT2120.1224888344494069No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTATAGAACAGCTAAAAATCTTG2070.11959994684446808No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACAGTGAAACAAGA2060.11902216932348031No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA2030.117288836760517No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGACACTTTGGACTCTGCCTCTAT2010.11613328171854145No Hit
CATAGAGAACAGCCCTGAGAGAATGCTATTGTGCAGCAACAAAAGTCACT2000.1155555041975537No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT2000.1155555041975537No Hit
CATAGAACATCTACAGAACTCTCTACCCATAGAACATTAGCTTAGTTAAT2000.1155555041975537No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCTAACTTCATAGCACATCATG1990.11497772667656593No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG1950.11266661659261484No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG1950.11266661659261484No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATAGAACAGCTAAAAATCTT1940.11208883907162707No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA1900.109777728987676No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC1890.10919995146668825No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACATTAGCTTAGTTAATTAGG1890.10919995146668825No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC1850.10688884138273717No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTTCACTCTGATGGTACTTCT1840.10631106386174939No Hit
CATAGACCCCATGTGCAGTGTAAGCTGGTGGAGGGCTTTGCTGTTTCTAT1830.10573328634076162No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTGTTCACTCTGATGGTACTTCTA1830.10573328634076162No Hit
CATAGAAGTGACCCTCAGCTCAGTGACAGTGAAACAAGATCGTGCCTCTA1810.10457773129878609No Hit
CATAGATGTGGTCTCAGTGCCCTATGTCCAGTGAACTCAAGGGGGTCTAT1800.10399995377779832No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1790.10342217625681055No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG1770.10226662121483501No Hit
CATAGATGTGCCACATACCTTTCCCATAGAACAGCTAAAAATCTTGGAGC1750.10111106617285949No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACATAGAACATTAGCTTAGTTA1750.10111106617285949No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)