FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804650

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804650
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences223080
Sequences flagged as poor quality0
Sequence length150
%GC35

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC130395.844988344988345No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA106554.7763134301595835No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA102514.595212479827864No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC87993.9443249058633674No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA62802.8151335843643537No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA62042.7810650887573964No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT60882.729065805988883No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA55992.509861932938856No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA51962.3292092522861756No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA39441.7679756141294602No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT36471.6348395194549041No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG35411.5873229334767796No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG27921.2515689438766362No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC25801.1565357719203873No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG24701.1072261072261071No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT21610.9687107764030841No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA20520.9198493813878429No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG20420.9153666845974539No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC20280.9090909090909091No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT18510.829747175901022No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA17810.7983682983682983No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT16930.7589205666128743No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT16250.7284382284382284No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC15520.6957145418683881No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC15440.6921283844360767No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA15380.6894387663618433No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT14710.6594046978662363No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT14330.6423704500627577No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC14200.6365429442352519No Hit
CATAGAGCACCCAACTATCCTTCAGCAGGTCTGGTGAAAAGTAGGGGACA12590.5643715259099875No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA12540.5621301775147929No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT12220.5477855477855478No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT11580.5190962883270576No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA11520.516406670252824No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTATATGACACAT11320.507441276672046No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT11300.5065447373139681No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA11060.49578626501703427No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC10680.47875201721355565No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT10170.45589026358257123No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATACTGCTCTAGTCACTCAAA9890.44333871256948176No Hit
CATAGACCATGTAATACCATCGTGAGCAGTCAGGAATTAGAGCCAGTTCT9880.44289044289044294No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT9850.4415456338533261No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGAAAATGTCAGTGGGC9660.4330285099515868No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9580.4294423525192756No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG9540.42764927380311996No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA9530.4272010041240811No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA9190.4119598350367581No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG9070.4065805988882912No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA8890.3985117446655908No Hit
CATAGAGCACCCAACTATCCTTCAGCACACTGACGACAATGGGCACACTT8760.392684238838085No Hit
CATAGATGCACCAGAAGCCACCTACCGGCTCTCTTCCGCCTTTATCCTTC8530.38237403622019006No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT8470.3796844181459566No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG8340.3738569123184508No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT8180.36668459745382825No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATAGAAAGAACAAGGGCATGGT8080.3622019006634391No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT7970.3572709341940111No Hit
CATAGACCATGTAATACCATCGTGAGCAGTGTAGGGCAAGTGTATGGTCA7900.3541330464407388No Hit
CATAGACAGAACACCACACCCCTGTCAGTGTAGGAATTAGAGCCAGTTCT7890.35368477676169985No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACCCGTAATCCCTCCCTTTTC7770.34830554061323293No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA7710.3456159225389995No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT7680.3442711135018828No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGGAAAATGTCAGTGGGCCATC7670.34382284382284384No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT7470.33485745024206565No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCCTGGTGGTGCTGGAACTA7400.33171956248879325No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG7350.32947821409359873No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGTAGTCACTCAAATATAGACCT7250.32499551730320964No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA7250.32499551730320964No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT7220.3236507082660929No Hit
CATAGATGGCATGTCACTTCCTCAGACCTTTTAGCTATTAAGATGTTGGT7070.3169266630805092No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA6760.30303030303030304No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGAAAATGTCAGTGGGCCA6740.3021337636722252No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGTGTAGGGCAAGTGTATGGT6590.29540971848664155No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGTCAGTGTAGTCACTCAAA6310.2828581674735521No Hit
CATAGAAGGGCAATTATCTCATCCTAGACATTATCTCAACTCCCAGCTCC6200.2779272010041241No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA6170.27658239196700735No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAGGAATTAGAGCCAGTT6060.2716514254975793No Hit
CATAGATGCCATAGACTTTAGGACAATAAGATGGACCTTTTAGCTATTAA5980.2680652680652681No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA5920.2653756499910346No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGGATGACTTATGGAATCT5840.2617894925587233No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTCTGGTGGTGCTGGAACTAG5800.25999641384256766No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT5680.2546171776941008No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT5630.25237582929890623No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT5440.24385870539716695No Hit
CATAGAATCCCTGCCCTTGACCTTGGTACTCCTACAATCCTGGCAAAAGG5380.2411690873229335No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCACAGCCCAGTTTTCCTTCT5270.23623812085350548No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT5180.23220369374215527No Hit
CATAGACAGAACACCACACCCCTGTCTATCTTAGGAGTTCTGGCCCCTGT5080.2277209969517662No Hit
CATAGACAGAACACCACACCCCTGTCTATCTGGTGGTGCTGGAACTAGTT5070.22727272727272727No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5050.22637618791464947No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACAGCCCAGTTTTCCTTCTCT5030.22547964855657165No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA4970.2227900304823382No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGGAGGAACAGGGAGATGTT4940.22144522144522147No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4830.2165142549757934No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT4590.2057557826788596No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG4510.20216962524654833No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT4490.2012730858884705No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGAGGAACAGGGAGATGTT4480.2008248162094316No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGGGCAAGTGTATGGTCAGT4420.19813519813519814No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG4400.19723865877712032No Hit
CATAGAGTCATTCCAAACTGTGCACTTACACTGATCTAGCTTCGGAATGT4360.19544558006096466No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT4230.18961807423345883No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA4180.18737672583826429No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG4160.1864801864801865No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC4110.18423883808499192No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTACCCCTTCATTTTGCTG4070.18244575936883628No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA4050.18154922001075846No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC4020.18020441097364176No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG3850.17258382642998027No Hit
CATAGACCCACTTACACACACAGGTTTTGGGGGAAGAGAAACAGAATCTA3720.16675632060247444No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC3700.16585978124439663No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA3570.1600322754168908No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTGTGCCCTGTGATTGTCCTGG3490.15644611798457952No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA3480.15599784830554062No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGAGAAGGAAAATGTCAGTGGGCC3200.14344629729245115No Hit
CATAGAAAAGTCACCATGCAGCCCTGACTGGTGAAAAGTAGGGGACAGTT3180.1425497579343733No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGCCATCTATCCCCTTTACCTAC3140.14075667921821766No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAACAAGGGCATGGT3110.13941187018110093No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTAGCCTTCTCTGATACCA2780.12461897077281692No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACTCCAGTCTCGGCAAC2770.12417070109377801No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGATCTGGGAGGAACAGGGAGATG2740.12282589205666128No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2740.12282589205666128No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC2710.12148108301954455No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGAACAA2650.1187914649453111No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2650.1187914649453111No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGCACCCCCCACAATGGGCA2640.1183431952662722No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTAAATGTTAGCTGTCTCAGAG2590.11610184687107764No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAAGTATATGACACATTACACC2570.11520530751299983No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGGTGAAAAGTAGGGGACAGTTCT2530.11341222879684418No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTTGGGAGGAACAGGGAGATGT2520.11296395911780527No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2490.11161915008068854No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2410.10803299264837726No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGAAAAGTAGGGGACAGTTCT2410.10803299264837726No Hit
CATAGAGACCCCCAAGTAGCCTAACTGTGCCCTGTGATTGTCCTGGTCTA2260.10130894746279362No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCCTTAGGAGTT2260.10130894746279362No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)