FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804652

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804652
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80646
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3733346.292438558638985No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG25903.2115665997073632No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA23932.967289140192942No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA19472.4142548917491258No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG19452.411774917540858No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA15041.8649406046177122No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC13481.6715026163727897No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC10111.2536269622795924No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC9271.1494680455323265No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG8050.9981896188279642No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG7670.9510701088708677No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA5860.7266324430225926No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA4550.5641941323810232No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCGGAGGGAAGGAAGGGCAA4010.4972348287577809No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG3840.4761550479875009No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA3230.4005158346353198No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC3200.39679587332291744No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA2880.3571162859906257No Hit
CATAGAACACAGATCTGCTTGGAGGTACGGGGGCAGATTAACAGGTCATC2670.33107655680380926No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT2550.3161967115541998No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT2460.3050368276169928No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2430.3013168663045904No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTGGCTAGGCTAGTCCGTCAC2400.29759690499218805No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGAGGGAA2350.2913969694715175No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGCTAGTCCGTCACCCCTAATC2310.28643702105498103No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA2280.28271705974257866No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCAGTTTTTCCAAATATAAGAT2230.2765171242219081No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2230.2765171242219081No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGTGCAGCTATATTGGAGGA2170.2690772015971034No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT2160.26783721449296927No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT2020.25047739503509164No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGATAGGCTAAGTTAGTGGCCCAAT2000.2479974208268234No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA1860.23063760136894576No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA1830.2269176400565434No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGAGGGAAGGAAGGGCA1760.21823773032760457No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1740.21575775611933634No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1720.21327778191106814No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1710.21203779480693402No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTATAGTTTTTCCAAATATA1700.2107978077027999No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAATATAAGACCAGCATGTTGA1700.2107978077027999No Hit
CATAGAGCTTCTGATCACTTTCGCCCTCTCTCCAGAACCCACCATCTATG1570.19467797534905637No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1520.1884780398283858No Hit
CATAGAAGATCCCATAGCAGCTTTGCCATGTCTTCTGTGTTTGGTCTATG1510.18723805272425167No Hit
CATAGAGGTCGCAGCTACCCAGAAAGATGGTTCTTATAGCCAGTGTCTCC1420.1760781687870446No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT1400.17359819457877637No Hit
CATAGATGTGCCTCTCCAACATTCATGCAAAGCTGGTCTATGAGACCAAG1390.17235820747464226No Hit
CATAGATGTGCCTCTCCAACATTCATTTCCCCTCTCTCTGAATAACTCTA1380.17111822037050817No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGTAGTGCTCACATCTATGAGA1370.16987823326637402No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA1340.16615827195397168No Hit
CATAGAACACAGATCTGCTTGGAGGTACACTGAGCAGAGTTGGGTGTGTC1310.16243831064156933No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT1290.1599583364333011No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGGGAGGGAAGGAAGGGC1280.15871834932916698No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC1270.15747836222503286No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1260.15623837512089875No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC1260.15623837512089875No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCATGGCGGTCACACCTGTAATC1210.15003843960022814No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCATGTCTTCTGTGTTTGGTCTATG1200.14879845249609402No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT1160.1438385040795576No Hit
CATAGACCCTTCTCCATGCCACACTCATGCAAAGCTGGTCTATGAGACCA1160.1438385040795576No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1160.1438385040795576No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1150.14259851697542347No Hit
CATAGAAGGAGGGGAAACTGAGACCAAGTCTCTGCTACCGTAATTGTGGA1130.1401185427671552No Hit
CATAGATCATGCAAAGAACACAGGCCTAGTTTTTCCAAATATAAGATCCC1100.13639858145475287No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1030.12771867172581405No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGAGGAGGGAAGGAAGGG990.12275872330927758No Hit
CATAGAAGATCCCATAGCAGCTTTGCCGTGGAGGAAAGGAGGTCTATGAG950.11779877489274111No Hit
CATAGACTCAAGCAATCCTCCCACCTTGACCTCTCAAAGTGCTAGGATTA950.11779877489274111No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA920.11407881358033876No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG900.11159883937207055No Hit
CATAGATCATGCAAAGAACACAGGCCTACGGGGGCAGATTAACAGGTCAT890.11035885226793642No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTACG870.10787887805966817No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGTGGAGGTTGCAGTGAGCCAAGA860.10663889095553407No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG840.10415891674726582No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTCATGCAAAGCTGGTCTATGA830.1029189296431317No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGTCAGGGTGGCTCACGCCTGTAAT810.10043895543486347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)