FastQCFastQC Report
Wed 8 May 2024
EGAF00005804653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80646
Total Bases12 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3760146.624755102546935No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA43965.450983309773578No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG26083.233886367581777No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG20452.5357736279542693No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT15131.876100488554919No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC13021.6144632095826204No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG9431.1693078391984724No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG8050.9981896188279642No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT5760.7142325719812515No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA4520.5604741710686209No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCGAGACTTGGCCTCAGTTTCCCCTC3990.4947548545495127No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG3620.4488753316965503No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT3290.4079557572601245No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG3200.39679587332291744No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC2690.3335565310120775No Hit
CATAGATGACCTGTTAATCTGCCCCCGTACCTCCAAGCAGATCTGTGTTC2680.33231654390794335No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG2620.32487662128313866No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG2450.30379684051285866No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT2390.29635691788805396No Hit
CATAGATTAGGGGTGACGGACTAGCCTAGCCAGACTTGGCCTCAGTTTCC2380.2951169307839199No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGACTTGGCCTCAGTTTCCCC2230.2765171242219081No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTGGTAGCAAAGCTGCT2230.2765171242219081No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA2210.2740371500136399No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC2170.2690772015971034No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA2170.2690772015971034No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT2110.26163727897229866No Hit
CATAGATGACCTGTTAATCTGCCCCCACCTCTTCCTTACATGCCGTGTGT2080.25791731765989634No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC2060.2554373434516281No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG1910.23683753688961634No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA1830.2269176400565434No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC1830.2269176400565434No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1820.22567765295240927No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGGTCTTATATTTGAGGTA1810.22443766584827515No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT1740.21575775611933634No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1680.20831783349453165No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATACGGTAGCAAAGC1610.19963792376559283No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG1590.19715794955732457No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA1530.1897180269325199No Hit
CATAGACCAAACACAGAAGACATGGCAAAGCTGCTATGGGATCTTCTATG1510.18723805272425167No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG1490.18475807851598344No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1440.17855814299531286No Hit
CATAGAGGGGAGACACTGGCTATAAGAACCATCTTTCTGGGTAGCTGCGA1430.17731815589117872No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1410.17483818168291052No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA1400.17359819457877637No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT1350.1673982590581058No Hit
CATAGATGTGAGCACTACTGATAATCCCTTTGGTCTCATAGATGTGAGCA1340.16615827195397168No Hit
CATAGACACACCCAACTCTGCTCAGTGTACCTCCAAGCAGATCTGTGTTC1300.1611983235374352No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA1300.1611983235374352No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCAGAGACTTGGCCTCAGTTTCCCC1300.1611983235374352No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA1300.1611983235374352No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA1270.15747836222503286No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1260.15623837512089875No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA1250.15499838801676463No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1220.15127842670436228No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1200.14879845249609402No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG1190.14755846539195994No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA1180.1463184782878258No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA1170.14507849118369168No Hit
CAGTTTCCCCTCCTTCTATGTGTAGAACCATGTCGTCAGTGTAGATCTCG1160.1438385040795576No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1070.13267862014235052No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1060.1314386330382164No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTAGGCCTGTGTTCTTT1030.12771867172581405No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTCAGAGACTTGGCCTCAGTTTCCC1030.12771867172581405No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG1000.1239987104134117No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG970.12027874910100936No Hit
CATAGATACGATCATAAGGGTGGGGCATGGAGGCTCACACCTGTAATCCT960.11903876199687523No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT950.11779877489274111No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCGGCCTCCCAAAGTGTTGGG950.11779877489274111No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAGGCCTGTGTTCTTTGCATGAT920.11407881358033876No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGGCCTCAGTTTCCCCTCCTTCTA900.11159883937207055No Hit
CATAGACCAGCTTTGCATGAGTGTGGCAGAGACTTGGTCTCATAGACCAG870.10787887805966817No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTCAGTTTCCCCTCCTTCTATGT840.10415891674726582No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA830.1029189296431317No Hit
CATAGACTTACTGCCCTCACTCCGTCACCCAGGCTGGAGTCCAGTAGCGT810.10043895543486347No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)