FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804657

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804657
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92365
Sequences flagged as poor quality0
Sequence length150
%GC47

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3570438.65533481297028No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG49965.40897526119201No Hit
CATAGACTACCACTACCCAGCACAGCTACTTCTCTATGCACTTTGCCACA21102.284415092296866No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG19532.11443728685108No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT19212.079792129053213No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT14831.605586531694906No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG14331.5514534726357385No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA10471.133546256698966No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT9511.0296107833053645No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT9461.0241974773994478No Hit
CATAGACCATCCTCCCACCTTGACCTCTTAAGTAGCTGGGACTACAGGTG8650.9365019217235966No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC7970.8628809614031289No Hit
CATAGACCATCTGCGCATCCTGTCTGTACGGTAGCAGAGGCACTTGGTCC7880.8531370107724787No Hit
CATAGATCCCAGGCTTTAGAAAATATACCAAGGCTTGTGAGGGCTGAAGT7670.8304011259676284No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT7120.7708547610025442No Hit
CATAGACCATCTGCGCATCCTGTCTGCATGTAGGATGGGTTTTTGCCAGA6970.7546148432847941No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGAGACCACAGGCA6860.7427055702917772No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTAGCTGGGTTTACACGTG6490.7026471065879933No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAGGCTTGTGAGGGCTG4760.5153467222432739No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG4280.4633789855464732No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG4280.4633789855464732No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGATGGGTTTTTGCCA3790.4103285876684891No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG3710.40166729821902236No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTTGCTGTTTGTCTTCC3420.3702701239647052No Hit
CATAGACCATCCTCCCACCTTGACCTCCAGAGTAGCTGGGAATATAGACA3310.3583608509716884No Hit
CATAGAAGCAGCATTGATCATCCTCCAAGCAGCATTTTAACACAGCATTG3230.3496995615222216No Hit
CATAGACCATCCTCCCACCTTGACCTACGGTAGGGATAGTTTGAGGGTAA3210.34753423915985493No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGGGATAG3150.34103827207275483No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG2990.3237156931738212No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT2740.29664916364423755No Hit
CATAGACCATCCTCCCACCTTGACCTCCGAAACTGCTAGGATTACAGGCA2710.2934011801006875No Hit
CATAGAGCCTGGCATTTGAGGTAAGGTACGGTAGCATTTTAACACAGCAT2690.2912358577383208No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC2600.28149190710767064No Hit
CATAGACCATCCTCCCACCTTGACCTCCTGAGTAGCTGGGAACCCAGGAG2550.2760786012017539No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2510.2717479564770205No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC2330.25226005521572026No Hit
CATAGAGAATACAATGAACTGTGATGGCATTTAGGGCCTACCAAGATAAT2240.2425161045850701No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA2240.2425161045850701No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG2190.23710279867915335No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG2180.23602013749797002No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2110.22844150922968656No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1910.20678828560601958No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1910.20678828560601958No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1900.20570562442483625No Hit
CATAGATGACATAGACCTTATACCCTCATCAGTGTGCTTCCCTGCTTGTC1860.20137497970010285No Hit
CATAGACCATCCTCCCACCTTGACCTCCAAAGTAGCTGGGACTACAGGTG1850.2002923185189195No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG1840.19920965733773616No Hit
CATAGACCATCCTCCCACCTTGACCTCTATGTACTCCTATGTAATGTCTT1820.19704433497536944No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGTTTGTCTTCCATGCTTCTA1800.19487901261300275No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG1690.18296973961998592No Hit
CATAGACATGAGTGGCCGAACAGACCACCAAGAAATAAACCCAAACATTT1670.18080441725761923No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1600.17322578898933577No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1590.17214312780815244No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCACTTGGTCCAGACTTTCTATGTG1580.17106046662696908No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1560.1688951442646024No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA1560.1688951442646024No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA1550.16781248308341906No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1540.16672982190223568No Hit
CATAGACCATCCTCCCACCTTGACCTCATCCTCCCATCTCAAGTCTCACT1490.16131651599631897No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG1490.16131651599631897No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA1380.1494072430033021No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1330.14399393709738537No Hit
CATAGAGGTGAGCGGCTGTCTCCACCCCATCCTACATGTGTCTATGTGTA1300.14074595355383532No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTAGCATTTT1240.13424998646673522No Hit
CATAGAGGTGAGCGGCTGTCTCCACACGTCCGCGCAGAGCCTTCAGGTCA1220.13208466410436853No Hit
CATAGACCATCCTCCCACCTTGACCTGACCATCCTCCCATCTCAAGTCTC1210.13100200292318517No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1210.13100200292318517No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG1190.12883668056081848No Hit
CATAGACCATCCTCCCACCTTGACCTACAGGATAGTTGAAACTACAGGCG1190.12883668056081848No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1180.12775401937963513No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA1170.1266713581984518No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA1150.1245060358360851No Hit
CATAGACCATCCTCCCACCTTGACCTGTCCTCCCATCTCAAGTCTCACTC1150.1245060358360851No Hit
CATAGACCATCCTCCCACCTTGACCTCTGGAATAGCTGGGACTACAGGCA1150.1245060358360851No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC1130.1223407134737184No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1120.12125805229253506No Hit
CATAGAGATCAATCCCTGTCTACATAACCATGTCGTCAGTGTGCCACCCC1050.11367942402425162No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG1030.11151410166188491No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA990.10718345693715152No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGACA980.10610079575596816No Hit
CATAGACCATCCTCCCACCTTGACCTGCGTCATGAGCCACCATGCCCGGC980.10610079575596816No Hit
CATAGAAGGTGATAATCATGACAGCCAAGCCAGCCAGCCAAACCAGCCAA950.10285281221241813No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGCAAAAAAGAAGCAGG950.10285281221241813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA950.10285281221241813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA940.10177015103123477No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)