FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804658
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116669
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1965116.84337741816592No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA110699.487524535223582No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG59275.080184110603502No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG50844.357627133171622No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG44943.8519229615407693No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC38423.293076995602945No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA35123.010225509775519No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG29162.4993785838568945No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT29012.486521698137466No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA20291.7391080749813574No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA18221.5616830520532448No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT18061.5479690406191877No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA17691.5162553891779307No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC16081.3782581491227317No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT15521.3302591091035323No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA13491.1562625890339335No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA12171.043121994702963No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG10700.9171245146525641No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT10530.9025533775038785No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC9390.8048410460362221No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT7560.6479870402591948No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA7190.6162733888179379No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA7170.6145591373886808No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC6510.5579888402231955No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6430.5511318345061671No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT5830.4997042916284531No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGTCATTGTCGCTGTC5600.4799904001919961No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC5420.46456213732868196No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT5290.45341950303851064No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGTTTCCCCACTCAAATACC5160.44227686874833927No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT4700.40284908587542534No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG4630.3968492058730254No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT4500.3857065715828541No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA4340.37199256014879706No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG4200.3599928001439971No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGACATGGTTCTACACA4150.3557071715708543No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA4040.3462787887099401No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3920.33599328013439733No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTGCTGAAGTGATGGGCTAGATC3810.3265648972734831No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC3640.3119937601247975No Hit
CATAGACCAGCAGACACTCCCATCATTGCTTCTTGTGGTAACTGGTCTAT3470.2974226229761119No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGTGTGCTTGAACCAGATTC3190.27342310296651207No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGGTGCATTACAGAGAGGAGAT3120.26742322296411214No Hit
CATAGAAGGACAAAGACATTTAGGACCCTACGCTATACCACACTACACAC3080.2639947201055979No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT3020.2588519658178265No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2980.25542346295931223No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGGCTCAGGTATGTCTT2940.251994960100798No Hit
CATAGACCAGCAGACACTCCCATCATTTGGTGGAAGGGTAAGAGAGGGTC2870.24599508009839804No Hit
CATAGACACAACAGAGAGAACGGGCTGTTCTCCGCTATGTAGTTCAGGTG2870.24599508009839804No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGACATGGTTCTACAAAGGATTC2760.23656669723748383No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG2760.23656669723748383No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT2730.23399532009359814No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG2540.2177099315156554No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAAACTGCTGGGGTTGCTCTAT2420.20742442294011265No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC2400.2057101715108555No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAGGGGTAAGGCGTACTGGTCTA2390.20485304579622696No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA2230.1911390343621699No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT2210.18942478293291276No Hit
CATAGATCAAGGAAAACACCAGCCCATGTTCTTCCTTTTCTGCCTTCATC2160.18513915435976994No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGACATGGGTCTACCAGT2110.18085352578662714No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA2110.18085352578662714No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT2100.17999640007199855No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC2100.17999640007199855No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA2090.17913927435736998No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA2080.17828214864274144No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1960.16799664006719867No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGCCCTCTCTGCTGTTCCT1940.16628238863794154No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG1910.16371101149405584No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT1910.16371101149405584No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1760.15085412577462737No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC1720.1474256229161131No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT1700.14571137148685598No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG1640.1405686171990846No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1590.13628298862594176No Hit
CATAGAAATGATGCTGAAGGGCCTGCGACATGGTTCTACACATAGAAATG1570.13456873719668463No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT1540.13199736005279894No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGTCCTGAAATGCCAGAAAGCG1510.12942598290891325No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC1460.12514035433577042No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGATCATTGTTCACTGCAG1420.12171185147725617No Hit
CATAGAGAAGACTCCCTCAACCCACCCTGCAGTCTTTGGAGGAATCTATG1380.11828334861874192No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1350.11571197147485623No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATGGTTCTACACATAGAAATGAT1320.11314059433097051No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA1280.10971209147245627No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATGAGACCAAGTCT1220.10456933718468488No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1190.10199796004079918No Hit
CATAGAGAAGACTCCCTCAACCCACCAAGGCTAATCTGAAATCTTCGTGT1180.10114083432617063No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)