FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804665

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804665
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17846
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG958853.726325226941604No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA3922.196570660091897No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA3712.0788972318726886No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG3331.8659643617617394No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC2651.4849265941947776No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG2481.3896671523030373No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG2451.3728566625574359No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC1710.9581979154992716No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTACACTGACGACATGGTTCTAC1500.8405244872800628No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA1480.8293174941163286No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA1340.7508685419701894No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC1240.6948335761515186No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG1180.6612125966603161No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG1130.6331951137509806No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG730.4090552504762972No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG680.3810377675669618No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA660.3698307744032276No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT650.36422727782136055No Hit
CATAGAAGATGGTCTGCTACACTGGTCACTGACGACATGGTTCTACACAT530.2969853188389555No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG520.2913818222570884No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG470.263364339347753No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG470.263364339347753No Hit
CATAGATTAAATGCTGCTATGAGAGAGGTGTTCTACACATAGATTAAGTG440.24655384960215174No Hit
CATAGACTCAAGCAATCCTCCCACCTACACTGACACATGGTTCTACACAT440.24655384960215174No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTACCGTAGGCTAGTC430.24095035302028464No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGAGGGAAGGAAGGGCAAACTCTA400.2241398632746834No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT400.2241398632746834No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG400.2241398632746834No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG370.20732937352908215No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG360.20172587694721505No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC360.20172587694721505No Hit
CATAGAAGATGGTCTGCTACACTGGTACACTGACGCCATGGGTCCTTTTC350.196122380365348No Hit
CATAGAGGAAGTGCCTACCTTAAATTGATGGTTGGTCTCTTAGGTAGAGG350.196122380365348No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG340.1905188837834809No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT340.1905188837834809No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCGCGGTGGCTCATGCCTGTAAT330.1849153872016138No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTAGCATGTTGAGATGAATAATT320.1793118906197467No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG310.17370839403787966No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGAGGAGGGAAGGAAGGG310.17370839403787966No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA310.17370839403787966No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA310.17370839403787966No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG290.16250140087414547No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG280.1568979042922784No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG280.1568979042922784No Hit
CATAGAAGATGGTCTGCTACACTGGTGTATATGCCATGTCTTCTGTGTTT270.1512944077104113No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA270.1512944077104113No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG270.1512944077104113No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA260.1456909111285442No Hit
CGTAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG240.13448391796481005No Hit
CATAGATCATGGGACTTCAGCGTGGCGGTGTTTGCAGATTTGGACCTGCG240.13448391796481005No Hit
CATAGAAGGAGGGGAAACTGAGGCCACTGCCAGGCCCACAGATACTGTGC240.13448391796481005No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCCGAGA230.12888042138294295No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCACAAATTGCTGGGATTA230.12888042138294295No Hit
CATAGATCATGGGACTTCGGCATGGCGGTGTTTGCAGATTTGGACCTGCG220.12327692480107587No Hit
CATAGACCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG210.11767342821920879No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT200.1120699316373417No Hit
CATAGATCGTGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG200.1120699316373417No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATTCTTATAGCCAGTGT190.10646643505547461No Hit
TAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGAG190.10646643505547461No Hit
CATAGAACACAGATCTGCTTGGAGGTGTCTCATAGAAAACCACTTGAACA190.10646643505547461No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTATAGCCAGTGTCTCCCCTCTATG190.10646643505547461No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGGTTGCAGATTTGGACCTGCG190.10646643505547461No Hit
CATAGGTCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG180.10086293847360753No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGAGTGGACTGGTGGCTGCGCTTCT180.10086293847360753No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCTTCTTATAGCCAGTGTCTCCC180.10086293847360753No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTT180.10086293847360753No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)