FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences178189
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4035522.647301460808468No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT132837.454444438208868No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG105895.942566600631913No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA63823.5815903338589923No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT59303.327927088653059No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG59013.311652234425245No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA57363.2190539258876814No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG57293.215125512798209No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG57013.199411860440319No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT53102.9799819292997887No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA41842.3480686237646546No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT30391.7054924827009523No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG30281.6993192621317814No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT21271.1936763773296892No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATAGAGGTTTCCTGGGCAT20661.1594430632642867No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT20221.134750180987603No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT14930.8378743917974736No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT14920.8373131899275488No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC13740.7710913692764425No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC12780.717215989763678No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTGTAGAGGTTTCCTGGGCAT12400.6958903187065419No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA11940.670075032690009No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATAGAGGCAAGGGTAC11550.6481881597629483No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTCAGGAAAGTTGGAACC10830.607781625128375No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA10310.5785991278922941No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG10150.5696198979735No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG9700.5443658138268916No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTACCAAAAGCACAAGGG9560.5365089876479469No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT9160.5140609128509616No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT9060.5084488941517153No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT8290.4652363501675188No Hit
CATAGAGGGCTATCCTTGCTCAGATCACATTTATCGGGAGCCACAGATCT8220.46130793707804635No Hit
CATAGATAGCAGCAATCTCAGGCCTCAGAGACTTGGTCTCATAGAGAAGC7130.4001369332562616No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG6790.38105606967882416No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC4710.264326080734501No Hit
CATAGAACAATCAGGCACCCACCATGTGTAAGGTAAACAAACTTCTGGCC4360.24468401528713893No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGCTCATGAGAAGCTTTG4210.23626598723826947No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC4160.23345997788864634No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG3900.21886872927060594No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA3480.19529825073377144No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC3420.19193103951422366No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA3350.18800262642475124No Hit
CATAGATCCAGCTTCATCCATGTCCCATTGTCGCCTTCTCTTCTCTATGT3340.18744142455482662No Hit
CATAGACTCACTCTGTCACCCAAGCTGCTGCTCACTCTTTGGGTTCTATG3010.1689217628473138No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG2920.16387094601799215No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCTTCTTCCTCCTCCTGTCTATG2920.16387094601799215No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA2850.15994253292851973No Hit
CATAGATCCAGCTTCATCCATGTCCTCCGATGCTTATTACATTGTTCTAT2790.15657532170897193No Hit
CATAGACACAACGTTTGAGACTGCCTCCTCAAGTGGGTCCCTGACCTCCA2690.15096330300972563No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCCATACCAAGAATAAGAA2490.139739265611233No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA2440.13693325626160988No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCATGTCGTCAGTGTACCAAA2230.12514801699319264No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC2140.12009720016387093No Hit
CATAGAGAAGCTTTGAGATTTGTGTCTGTTCTATGTGTAGAACCATGTCG2000.11224037398492612No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG1970.11055676837515221No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACCCCATATCTACCAAAGA1970.11055676837515221No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC1970.11055676837515221No Hit
CATAGAACTGAAACTAGGAAACATGTCTGATAGAACTGAAACATTTTCTG1850.10382234593605666No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA1830.1026999421962074No Hit
CATAGATGAAAGAGCATTGGTTGTAACACATTTATCGGGAGCCACAGATC1800.1010163365864335No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)