FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804669

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804669
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122200
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4275634.9885433715221No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC48613.9779050736497545No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT29962.451718494271686No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA27422.243862520458265No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC20681.6923076923076923No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA19261.5761047463175124No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA15931.3036006546644845No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA14331.172667757774141No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA13851.1333878887070377No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA13411.0973813420621932No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA13361.09328968903437No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT13221.0818330605564648No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA10690.8747954173486089No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT10690.8747954173486089No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA10030.820785597381342No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA9720.795417348608838No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG7120.5826513911620295No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC5200.425531914893617No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT4310.3527004909983633No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG4240.3469721767594108No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA4130.33797054009819966No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTTGCACAGATCATTTAAGC3940.3224222585924713No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGAGACCAAGTGGAGACAGCCGC3460.28314238952536824No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTGGAGACAGCCGCTCACCTC3310.27086743044189854No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC3260.2667757774140753No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT3220.26350245499181674No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT3120.2553191489361702No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG2990.24468085106382978No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC2970.2430441898527005No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2820.23076923076923078No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA2770.22667757774140754No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG2600.2127659574468085No Hit
CATAGATGCCCTTTTTGTGTACTTCCATCATAGAATCCTTTCCCTCACTC2560.20949263502454993No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCT2530.20703764320785598No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA2360.19312602291325698No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA2300.18821603927986907No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC2300.18821603927986907No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA2200.18003273322422259No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA2170.17757774140752866No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2140.17512274959083468No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGTGAAACCCCATCTCTA2110.17266775777414076No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG2090.17103109656301146No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2040.16693944353518822No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT2030.16612111292962356No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1950.15957446808510636No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1940.15875613747954173No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1930.15793780687397707No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATATCCCCAGAAA1830.1497545008183306No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACCAAAACAGAGATATAG1830.1497545008183306No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTCTGTCTCTA1790.14648117839607203No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA1770.1448445171849427No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG1770.1448445171849427No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTTGTCTCTA1760.14402618657937807No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG1750.1432078559738134No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG1720.14075286415711946No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG1670.13666121112929625No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA1660.13584288052373159No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA1660.13584288052373159No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCCATCTCTA1620.132569558101473No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG1620.132569558101473No Hit
CATAGAGGATCCCATCTGAGTTGGTCAGTGTACCATGTTTTCATCCTGCT1600.1309328968903437No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1580.1292962356792144No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCCGTCTCTA1540.1260229132569558No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCTGTCTCTA1530.12520458265139117No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG1520.12438625204582651No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCGTCTCTACTAAAAATA1470.12029459901800328No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTAAAACCCCATCTCTA1460.11947626841243864No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA1460.11947626841243864No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGATCTATCCAGGAATTTT1450.11865793780687399No Hit
CATAGAGCTGGCTTCCTAACTTCCAACATAGAGCTGCCTTCCTAACCATG1430.11702127659574468No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCTTCTCTA1410.11538461538461539No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG1410.11538461538461539No Hit
CATAGATCATGGGACTTCAGCATGGCTCTACACATAGATCATGGGACTTC1410.11538461538461539No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAAACCCATCTCTA1400.11456628477905073No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACCCCATCTCTA1380.11292962356792144No Hit
CATAGATCATGGGACTTCAGCATGGCCAACAAGGTGAAACCCCATCTCTA1380.11292962356792144No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1320.10801963993453355No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA1280.10474631751227496No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACGGTGAAACCCTGTCTCTA1250.10229132569558103No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG1250.10229132569558103No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCCATCTCTA1240.10147299509001638No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA1230.10065466448445173No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)