FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804673

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804673
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40015
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1125328.121954267149817No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC30997.744595776583781No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA20925.228039485193053No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT18734.680744720729726No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT11062.763963513682369No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA8882.2191678120704736No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT8542.1341996751218293No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC8492.1217043608646757No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA8192.0467324753217544No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA8132.0317380982131703No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA7571.89179057853305No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG5431.3569911283268774No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG4941.2345370486067724No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA4671.1670623516181433No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT3650.9121579407722104No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA3000.749718855429214No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGAACCTGCG2710.6772460327377234No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC2540.6347619642634013No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2410.602274147194802No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACTGATACAGGAAGGCC2320.5797825815319255No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGTGAACATTAGCCAGGTG2010.5023116331375734No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT1910.47732100462326627No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG1880.46982381606897416No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGAATCCTATCCCCAGAAATGTTA1740.43483693614894414No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT1640.40984630763463703No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC1570.39235286767462196No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT1560.38985380482319126No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT1520.3798575534174684No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA1430.35736598775459205No Hit
CATAGATGCCCTTTTTGTGTACTTCCAACACTGACTGATACAGGAAGGCC1360.33987254779457704No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1330.3323753592402849No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG1330.3323753592402849No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC1210.3023866050231164No Hit
CATAGACACCATGCCTGGCTAATTTTTAAAAAGTAGCTGGGCATGGTGGC1210.3023866050231164No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGAGCAGAATTACCTCTGGATG1120.2798950393602399No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT1110.2773959765088092No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT1010.25240534799450204No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG970.24240909658877918No Hit
CATAGATTGGAACTTTGCCAGCCTTAATCCTTTCCCTCACTCTCTCCATC840.20992127952017994No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA820.20492315381731852No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT800.1999250281144571No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC760.1899287767087342No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA740.18493065100587278No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC710.17743346245158065No Hit
CATAGATCCCATCCAATAATAATGAGCAGTGTACCTGATTGGCCATTTGA660.1649381481944271No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG660.1649381481944271No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATAAACAATCA650.16243908534299636No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA650.16243908534299636No Hit
CATAGATGTCCATCATGTGGAAGCTGACTGCCTCAGCCACCTGATTGGCC630.15744095964013494No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAACC620.15494189678870424No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC610.1524428339372735No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG610.1524428339372735No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA560.13994751968011995No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA560.13994751968011995No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA550.13744845682868925No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTGCTCTCTACTAAAAATA550.13744845682868925No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC550.13744845682868925No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGACTGATACAGGAAG530.13245033112582782No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC520.1299512682743971No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATCTGTTATTCAAAGGTTTT520.1299512682743971No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA510.1274522054229664No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTGATACAGGAAGGCCTTTCTAT510.1274522054229664No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA490.12245407972010497No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACACAAGCAATGGGGAAAGGA480.11995501686867426No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA480.11995501686867426No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG470.11745595401724354No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG470.11745595401724354No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG440.1099587654629514No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG440.1099587654629514No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG430.10745970261152069No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)