FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804674

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804674
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40015
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1133028.314382106709985No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA31427.852055479195302No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT19914.975634137198551No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT19544.883168811695614No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG11852.9613894789453954No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG9942.4840684743221293No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT8322.0792202923903536No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA8102.024240909658878No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA7411.8518055729101586No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC5471.3669873797326002No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG5201.299512682743971No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA4851.212045482943896No Hit
CATAGACATGCTAACATTTCTGGGGATACGGTAGCAAGACTTGGTCTCAT4661.1645632887667126No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT3580.8946645008121954No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATCACTTATACGCCTCCCTGTCTA2960.7397226040234911No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCATGATTGT2610.6522554042234162No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT2530.6322629014119705No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT2390.5972760214919405No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCATCACTTATACGCCTCCC2180.5447957016118956No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG1890.47232287892040486No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG1860.46482569036611265No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGAGTAACAC1850.462326627514682No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCACC1740.43483693614894414No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG1720.42983881044608274No Hit
CATAGACATGCTAACATTTCTGGGGATAGGATTCTGGAAGTACACAAAAA1710.427339747594652No Hit
CATAGACATGCTAACATTTCTGGGGATAGACTTGGTCTCATAGACATGCT1710.427339747594652No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT1640.40984630763463703No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA1620.4048481819317756No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG1620.4048481819317756No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC1550.38735474197176056No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGGAAGTACACAAAAAGGG1350.33737348494314634No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT1340.3348744220917156No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG1330.3323753592402849No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA1240.3098837935774085No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGAACCACAGGCATGTGCCAC1170.2923903536173935No Hit
CATAGACCATCCAGAGGTAATTCTGCTCTATGGAAGTACACAAAAAGGGC1110.2773959765088092No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTTGTA1070.26739972510308635No Hit
CATAGACCAGACTTTTGAAAGAAGCACATGGAAGTACACAAAAAGGGCAT1070.26739972510308635No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT990.2474072222916406No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGAAGTCAAATTGTCC870.21741846807447207No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTAAGGCTGGCAAAGTTCCAATC870.21741846807447207No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATGGAAGTACAC750.1874297138573035No Hit
CATAGAGTTCAAATGGCCAATCAGGTACACTGCTCATTATTATTGGATGG700.17493439960014995No Hit
CATAGAGTTCAAATGGCCAATCAGGTGGCTGAGGCAGTCAGCTTCCACAT680.16993627389728852No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT660.1649381481944271No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA630.15744095964013494No Hit
CATAGACATGCTAACATTTCTGGGGATTACGGTAGCAAGACTTGGTCTCA570.14244658253155068No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA570.14244658253155068No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA570.14244658253155068No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA560.13994751968011995No Hit
CATAGACATGCTAACATTTCTGGGGATACGGTAGCAGAGACTTGGTTCAT560.13994751968011995No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGCGTGCGCCAC560.13994751968011995No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATAGAGCAGGAATTAGACTCTT550.13744845682868925No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA530.13245033112582782No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCAACCCCTTAAGAAAATTT530.13245033112582782No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCAGGCA510.1274522054229664No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC500.12495314257153567No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA500.12495314257153567No Hit
CATAGAAAGGCCTTCCTGTATCAGTCACCCTGCTTATCAAACATCTCTAT480.11995501686867426No Hit
CATAGAATCCTTTCCCCATTGCTTGTGTCTCATAAATTCAACAGGCTTTC480.11995501686867426No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG480.11995501686867426No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGGAAGTTAGGAAGCCAGCTCTA480.11995501686867426No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG470.11745595401724354No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG470.11745595401724354No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA450.11245782831438211No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG420.10496063976008997No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)