FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005804905

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005804905
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences156570
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2346014.983713355048861No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT116137.417129718336845No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA85285.446765025228332No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT80365.132528581465159No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG70724.516829533116178No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG54973.510889697898704No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA29521.885418662579038No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA27641.7653445743118095No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT23461.498371335504886No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC20091.2831321453662898No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT19611.2524749313406145No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT18941.2096825700964426No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA18621.1892444274126588No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAAGGAATCTTTGGGAGGCTATT17911.143897298333014No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA17141.0947180175001598No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT16311.0417065849140958No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC16281.039790509037491No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA15050.961231398096698No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG14350.9165229609759212No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG13160.840518617870601No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT12930.8258287028166316No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGAAGACACAGCACACTCTTC12350.7887845692022737No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA11450.7313022929041324No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC10520.6719039407293862No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA10480.6693491728939133No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG9940.6348598071150284No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9230.5895126780353835No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTGTAAGGAAACATTGGAAA9090.5805709906112283No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT8950.571629303187073No Hit
CATAGAAACAGCAAAGCCCTCCACCAGACTCTATGTGGAGGAGGAGCTGA8470.5409720891613974No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGCAACATATCAGAAGC8250.5269208660662962No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTTACGATAGCGAGAAGAGTGGA7930.5064827233825125No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG7640.4879606565753337No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT7520.4802963530689148No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT6610.42217538481190525No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA6560.41898192501756404No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG6460.4125950054288816No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC6200.3959890144983075No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA5720.36533180047263203No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTATAGACTCTGTTTACTCGGAGATT5470.3493645015009261No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACTGTCTTCAGCTCTTTGAGGC5190.3314811266526154No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5170.330203742734879No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA5140.32828766685827426No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA4930.31487513572204123No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCAGTGTCCCCAGGTAGCAAAACAG4830.3084882161333589No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA4710.30082391262694No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACACATAGACCTTTTTCTGTAGT4580.29252091716165296No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC4430.2829405377786294No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA4430.2829405377786294No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTCAGGAAACATTGGAAAG4390.2803857699431564No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3770.2407868684933257No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGGAGGAGCTGACTTACTGTTCTA3750.23950948457558918No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3740.23887079261672098No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA3720.23759340869898446No Hit
CATAGAGGCACGATCTTGTTTCACTGTTCATAGGGCACTGAGACCACATC3710.23695471674011626No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3450.22034872580954207No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3280.20949096250878202No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTAGGGTACTTTTCTAATCAATAGT3110.19863319920802197No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGTATATCTAGGAGTAGAA3050.19480104745481255No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGCAATATGGGCTGGGTGAT2950.18841412786613018No Hit
CATAGACCACACACACAACTGAGAGTGTGTTGTATTCTATGTGTAGAACC2870.18330459219518427No Hit
CATAGAGTCCTTCCCTCTCACACATGTGTCCTTCCACTACCCACCTGCCT2860.18266590023631601No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2740.17500159672989718No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGAAGTGTATTAAT2700.17244682889442423No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAGCATTCTCTC2650.16925336910008304No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT2580.16478252538800536No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGGGAAAGGTATGTGGCACA2520.16095037363479595No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACTAACCTCCCACCCCAGCTGTCT2490.15903429775819122No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAGGAGCTGACT2480.158395605799323No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA2480.158395605799323No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA2480.158395605799323No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2460.1571182218815865No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT2400.15328607012837708No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC2230.14242830682761703No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA2200.1405122309510123No Hit
CATAGAGCCCCCAGAGAAGAATGACCTAGAGCCCCCAGAGGAGAATGATA2200.1405122309510123No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT2130.13604138723893466No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1980.1264610078559111No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA1960.12518362393817462No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAACTTATCTGGGCACG1860.11879670434949223No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1820.11624193651401929No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT1660.10602286517212749No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)