FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806009

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806009
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59076
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1169719.799918748730448No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC34185.785767485950301No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA27184.600853138330287No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT18613.1501794298869257No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT16682.8234816169002643No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT16412.7777777777777777No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT16032.713453856049834No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA15902.6914483038797483No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT14722.49170559956666No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA13982.3664432256754013No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG12782.1633150517976842No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT11791.995734308348568No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA11201.8958629561920237No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG8141.3778861128038458No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA6931.1730652041438148No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA6741.140903243279843No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTTTA6621.1205904258920711No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA5660.9580878867898978No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC5100.8632947389802966No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA4930.8345182476809534No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT4110.6957139955311802No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT3760.6364682781501795No Hit
CATAGAGAGATTTTGGGCTGAGACGAGGATGCAGTGTCAGGAAAGGAAGG3390.5738370912045501No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT3270.5535242738167784No Hit
CATAGATCATGGGACTTCAGCATGACGGTGTTTGCAGATTTGGACCTGCG2910.4925858216534633No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG2890.4892003520888347No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG2860.48412214774189183No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT2800.47396573904800593No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA2730.46211659557180584No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA2650.44857471731329135No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT2560.43334010427246256No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTGTAATTTTTGTATTTTT2510.42487643036089107No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA2480.4197982260139481No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTT2330.39440720427923354No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA2310.39102173471460494No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2230.3774798564560905No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTGTTATT2110.3571670390683188No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC2010.3402396912451757No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA1820.3080777303812039No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC1800.30469226081657524No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCTCATCTCTA1730.2928431173403751No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACTAAAAATACA1660.28099397386417496No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT1570.2657593608233462No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG1530.258988421694089No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG1450.24544654343557454No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTAAAACCCCATCTCTA1390.23529013474168867No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA1360.23021193039474575No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1340.22682646083011715No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1270.21497731735391698No Hit
CATAGACACCATGCCTGGCTAATTTTTAAAAAGTAGCTGGGCATGGTGGC1220.20651364344234546No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA1220.20651364344234546No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC1120.1895862956192024No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1020.1726589477960593No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1020.1726589477960593No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG980.1658880086668021No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG890.15065339562597332No Hit
CATAGAGCGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC860.1455751912790304No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA860.1455751912790304No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC840.14218972171440178No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC840.14218972171440178No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACGACATGGTTCTACAC810.13711151736745886No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCCCTA800.13541878258514456No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCCGTCTCTA790.13372604780283026No Hit
CATAGATCATGGGACTTCAGCATGGCCATTATGGTGAAACTCTGTCTCTA790.13372604780283026No Hit
CATAGAGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACAATCA740.12526237389125872No Hit
CATAGACACCATGCCTGGCTAATTTTCGTATTTTTATCAAGGCAGGGATT730.12356963910894442No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA710.12018416954431581No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA690.11679869997968718No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTCCTAGATATACACTCA690.11679869997968718No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA680.11510596519737287No Hit
CATAGAGAGATTTTGGGCTGAGACGAGCAGGTCAGAAGTTCAAGACCAGC630.10664229128580134No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGTAACCTAGTCTCTA620.10494955650348703No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTATTTTTTTGTATTTTTAGT620.10494955650348703No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC600.10156408693885843No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)