FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59076
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1145919.397047870539645No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA42677.222899316135148No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG23133.915295551492992No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT19103.2331234342203268No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT17112.8962692125397793No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT16842.850565373417293No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC16422.779470512560092No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT16162.73545940821992No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA16152.733766673437606No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA14472.4493872300088024No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA12872.178549664838513No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT12282.078678312681969No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG9301.5742433475523054No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG8351.4134335432324463No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG6841.157830591102986No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG6581.113819486762814No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTATAGATGCTCACCAC6321.069808382422642No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGTGCCTGCCAC5460.9242331911436117No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA5180.876836617238811No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAGAAGTCAAATTGTCC4840.8192836346401247No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG4230.7160268129189519No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA4220.7143340781366376No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCGCCAC3570.6043063172862075No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG3410.5772225607691788No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC3370.5704516216399215No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG3020.5112059042589207No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG3010.5095131694766064No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT2900.4908930868711491No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGTGAAATTCCTGAGGTCAGG2880.4875076173065204No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT2870.48581488252420607No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT2300.3893289999322906No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA2280.385943530367662No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAGTGGTATT2190.3707089173268332No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACTTGGTCTCATAGAGCAGAAA2040.3453178955921186No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC1890.31992687385740404No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAACTACAGGTGTGCGCCAC1780.30130679125194665No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGAGCATGCACCA1700.2877649129934322No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT1630.275915769517232No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCAG1610.2725302999526034No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG1580.2674520956056605No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA1530.258988421694089No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA1490.25221748256483173No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGAGTAGCTGGGACTGCAGGCGTGT1470.24883201300020313No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT1340.22682646083011715No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGAACCACAGGCATGTGCCAC1320.22344099126548855No Hit
CATAGACATGCTAACATTTCTGGGGATAGTCTCATAGACATGCTAACATT1310.22174825648317423No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACTAC1270.21497731735391698No Hit
CATAGACATGCTAACATTTCTGGGGATAGACATGCTAACATTACTGGGGA1250.21159184778928838No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT1240.20989911300697406No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGGAAG1220.20651364344234546No Hit
CATAGACATGCTAACATTTCTGGGGATTGTGACTGGGGACTGTGACTCTG1140.192971765183831No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA1050.17773715214300223No Hit
CATAGACTGTCATTGCTTGCCCATTGGTCTCATAGACTGTCATTGCTTGC1010.170966213013745No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA950.16080980431985917No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG900.15234613040828762No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA840.14218972171440178No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT840.14218972171440178No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTATGTACCAC830.14049698693208748No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTGCCAC790.13372604780283026No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA750.126955108673573No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGCATTACAGGGGGCTGCCAC740.12526237389125872No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGAGCCCACCAC730.12356963910894442No Hit
CATAGACCCTGGATTAGCATGAGGAATCCCTGCCTTGATAAAAATACGAA730.12356963910894442No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACCCACCAC710.12018416954431581No Hit
CATAGAGTTCAAATGGCCAATCAGGTGAAACCCCGTGTCTACTAAAAATA680.11510596519737287No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG680.11510596519737287No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAGGGCATCTATGTGTAGAA650.11002776085042995No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTATAGGCATGCACCAC640.10833502606811564No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG630.10664229128580134No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACTGGCATGCACCAC610.10325682172117273No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTAGGACTACAGAGGCACACCAC610.10325682172117273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)