FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806225

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806225
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103787
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT1039510.015705242467748No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA96449.292107874782007No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA76067.328470810409781No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA59755.756983051827301No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA59025.686646689855184No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG53345.1393719830036515No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG48034.627747213042096No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT47484.574754063611049No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG20611.9857978359524797No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA20581.9829073005289681No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA18831.814292734157457No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA15521.4953703257633422No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA15281.4722460423752493No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT13531.3036314760037384No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA13201.2718355863451107No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA12441.198608688949483No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAGAACATTAGCTTAGTTAATT12201.17548440556139No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA9860.9500226425274841No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA8750.8430728318575544No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG8620.8305471783556707No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT7080.6821663599487412No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7000.6744582654860436No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT6990.6734947536782063No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC6670.6426623758274157No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC6290.606048927129602No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT5930.5713625020474626No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA5380.5183693526164163No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTACGGAGATAGAGAGGTTG5120.49331804561264897No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4920.4740478094559049No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACATTAGCTTAGTTAATT4480.4316532899110679No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT4330.4172006127935098No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT3960.3815506759035332No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3890.37480609324867276No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3860.37191555782516117No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA3320.31988592020195206No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3220.31025080212358No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC3150.3035062194687196No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG2970.2861630069276499No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2940.2832724715041383No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT2930.28230895969630104No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG2890.2784549124649523No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG2560.24665902280632448No Hit
CATAGATGCTTCTGATATGTTGCCGTACTCTCAGTTGTGTGTGTGGTCTA2520.24280497557497568No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACATAGAACAGCTAA2480.23895092834362686No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCATAGACCAAAGCTAGAAACT2260.21775366857120834No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2170.2090820623006735No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAGGGTAATGGAGGAGTAT2000.192702361567441No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1850.17824968444988293No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG1680.16186998371665046No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG1670.16090647190881324No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA1610.15512540106179No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1610.15512540106179No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1560.150307842022604No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1520.14645379479125517No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1470.14163623575206916No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT1460.14067272394423194No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGGGTAATGGAGGAGTATGGGAT1450.13970921213639473No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC1370.13200111767369707No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1370.13200111767369707No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTAGATGCTCAGATCTCAAAAGG1330.12814707044234827No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC1330.12814707044234827No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1260.12140248778748784No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA1240.11947546417181343No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA1160.11176736970911579No Hit
CATAGATGTGGTCTCAGTGCCCTATGTGTAGAGGGTGGGGAAAGAGAGCA1130.10887683428560417No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCCCTCATTATCCCTGTGCCTC1110.10694981066992976No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA1110.10694981066992976No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGAGGGTAATGGAGG1060.10213225163074374No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTAATGGAGGAGTATGGGATCTA1060.10213225163074374No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGATGGCTCACACCTATAATCCCA1060.10213225163074374No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGGTAATGGAGGAGTATGGGA1050.10116873982290653No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG1040.10020522801506933No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)