FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93615
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC75588.073492495860705No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC60516.463707739144368No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA58076.203065748010468No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA57196.109063718421194No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA34133.6457832612295036No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT30173.2227741280777655No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA27642.952518293008599No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG24202.5850558137050688No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT22692.423756876568926No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG20542.1940928270042197No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA19192.0498851679752175No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA16621.775356513379266No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC14761.5766704053837528No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG14111.5072370880734924No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG13821.4762591465042996No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG13591.4516904342252845No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC13421.4335309512364471No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT13301.4207124926560915No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA12381.322437643540031No Hit
CATAGAACCCTGCTTCCTAAATCAACAAGCACATTATTATTGGTTGGTTC10821.1557976819954068No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA10491.1205469208994285No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG9371.0009079741494418No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC9210.9838166960423009No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT8920.9528387544731078No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC7400.7904716124552689No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA6600.7050152219195641No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA6530.6975377877476899No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG6240.6665598461784971No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA6210.6633552315334081No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG6130.6548095924798376No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC5560.593921914223148No Hit
CATAGACCCACTTACACACACAGGTTTGGGGGAAGAGAAACAGAATCTAT5510.5885808898146665No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT5210.5565347433637772No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG5160.5511937189552957No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT4920.5255568017945842No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGAATTAGAGCCAGTTCTGA4850.5180793676227101No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT4380.4678737381829835No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4280.4571916893660204No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT4100.43796400149548687No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA4030.4304865673236126No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT3780.4037814452812049No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT3490.372803503712012No Hit
CATAGACCCCCATGCAACCACATCTATGACAATGGGCACACTTAACACCT3420.3653260695401378No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGATGACTTATGGAATCTGA3370.35998504513165624No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA3240.3460983816696042No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGACAATGGGCACACTTAACACC3210.3428937670245153No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT3130.3343481279709448No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA2920.31191582545532237No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT2820.30123377663835926No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2770.29589275222987765No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC2750.2937563424664851No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAACAAGGGCATGGTCAAGTGT2660.2841424985312183No Hit
CATAGATCTGGGAGGTGAAGAGGACAATGGGCACACTTAACACCTCTATG2620.27986967900443305No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG2480.26491481066068473No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA2440.26064199113389946No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA2410.25743737648881054No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCCAACTCTATAGATTATGCTCTCTT2310.24675532767184744No Hit
CATAGATCATGAATGACTCCCACTCTGAGGTTCTTCAACACAGCTATTCT2200.23500507397318807No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG2080.22218661539283235No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT2030.2168455909843508No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG2030.2168455909843508No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA1930.2061635421673877No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1920.2050953372856914No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGTGGTGCTGGAACTAGTTCTAT1810.193345083587032No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1740.18586764941515782No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCATGAGGTTCTTCAACACAGCT1550.16557175666292795No Hit
CATAGAACCCTGCTTCCTAAATCAACATCGGCCGCACTGAAATTGTCTAT1540.16450355178123163No Hit
CATAGAACCCTGCTTCCTAAATCAACATCCCCCTTCATTTTGCTGGAACT1530.16343534689953532No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA1520.16236714201783903No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC1500.1602307322544464No Hit
CATAGAAAAGTCACCATGCAGCCCTGAGGTTCTTCAACACAGCTATTCTA1420.15168509320087595No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG1410.15061688831917963No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT1380.14741227367409068No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA1350.14420765902900176No Hit
CATAGAGTCATTCCAAACTGTGCACTTAGTCACTCAAATATAGACCTCAA1350.14420765902900176No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCATCGGCCGCACTGAAATTGTC1290.13779842973882392No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT1280.1367302248571276No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGAACAAGGGCATGGTCAAGTGTC1240.13245740533034236No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT1230.13138920044864605No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1220.13032099556694973No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG1210.12925279068525344No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGGAGGAACAGGGAGATGTTC1160.12391176627677189No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC1150.12284356139507559No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA1150.12284356139507559No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT1130.12070715163168297No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT1110.11857074186829035No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT1110.11857074186829035No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTGGTGAAAAGTAGGGGAC1110.11857074186829035No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC1070.1142979223415051No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGTGGTGAAAAGTAGGGGACAG1070.1142979223415051No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGGATGACTTATGGAA1040.11109330769641618No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTGCCAAGATTGTAGGAG990.10575228328793462No Hit
CATAGACCATGTAATACCATCGTGAGCAGATGGTGAAAAGTAGGGGACAG950.10147946376114939No Hit
CATAGAATCCCTGCCCTTGACCTTGGGTCCATTTTTGGTTCTCTTCTATG940.10041125887945308No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)