FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806235

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806235
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences238956
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG202348.467667687775156No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT173477.259495471969735No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA111434.663201593598822No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA109854.597080634091632No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA83373.4889268317179734No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA82653.458795761562798No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG82513.4529369423659584No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT57362.4004419223622757No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA54932.2987495605885604No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA38941.6295887108923819No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA36081.5099014044426589No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG36061.5090644302716818No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA35151.4709821054922245No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG33671.4090460168399204No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT33141.3868662013090276No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACATTAGCTTAGTTAATTA28681.2002209611811379No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA23670.9905589313513785No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG22770.9528950936574098No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC21670.9068615142536701No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT21400.8955623629454795No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT20600.8620833961063963No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT19630.8214901488140075No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA19010.795543949513718No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT17930.7503473442809555No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA17070.7143574549289409No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC14930.624801218634393No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA13750.575419742546745No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG13190.5519844657593866No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA10810.4523845394131137No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA10730.4490366427292054No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACATAGACATGTGTGAGAGGGAA10050.42057952091598455No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG9970.4172316242320762No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT9700.40593247292388557No Hit
CATAGATGCTTCTGATATGTTGCCGTACCATGATGCTCAGATCTCAAAAG9390.39295937327374075No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT8940.3741274544267564No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT8650.3619913289475887No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG8640.36157284186210015No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT8620.36073586769112304No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG8460.3540400743233064No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT8320.3481812551264668No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTAATGGAGGAGTATGGGATCTA8180.34232243592962724No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACAGCTAAAAATCTTGGAGCT7760.32474597833910845No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACACATAGAACAGCTAA7240.30298464989370427No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG6910.2891745760725824No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG6840.2862451664741626No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC6470.27076114431108655No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG6180.25862501883191885No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA6020.2519292254641022No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG5660.23686369038651467No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT5610.23477125495907197No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG5500.230167897018698No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTACATGTGTGAGAGGGAAGG5480.2293309228477209No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTCTCAGTTGTGTGTG5390.22556453907832405No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATGACAGTGAAACAAGA5380.2251460519928355No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAAGCTAGAA5300.2217981553089272No Hit
CATAGAGCCTCCACTCTTCTCGCTATCACATAGACATGTGTGAGAGGGAA5250.21970571988148443No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTGGGTGGTGGAGGGCTTT5110.21384690068464488No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACTACAAGTACCCACCAC4630.19375952058119486No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG4510.18873767555533236No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT4330.1812049080165386No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGACTTGGTGGAGGGCTTTGCT4160.1740906275632334No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3960.16572088585346256No Hit
CATAGAATACAACACACTCTCTGCCCTGTGTACAGGTGCAAATTGTCAGT3910.16362845042601984No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3890.16279147625504276No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3810.15944357957113445No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA3770.15776963122918025No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT3690.15442173454527192No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT3680.1540032474597834No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACGCAAACTAACACAGA3430.14354107032256985No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGGTCCAGTGAACTCAAGGG3340.13977468655317296No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAACAGCTAAAAATCTTG3330.13935619946768443No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGGTGGAGGGCTT3280.1372637640402417No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTAGAACAGCTAAAAATCTT3280.1372637640402417No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG3270.13684527695475318No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA3050.12763856107400526No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGTTTAGTTAATTA3040.1272200739885167No Hit
CATAGACTCTGTTTTGCTACCTGGGGAACACTGACGACATGTGTGAGAGG2990.125127638561074No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT2840.11885033227874586No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC2700.11299151308190629No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTATGGCACAACTG2690.11257302599641775No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2680.11215453891092922No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG2560.1071326938850667No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAATCCTTCTATGAG2550.10671420679957816No Hit
CATAGATGTGGTCTCAGTGCCCTATGACACTAGCCTGTTCACTCTGATGG2520.10545874554311253No Hit
CATAGAGAATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA2500.10462177137213545No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG2500.10462177137213545No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC2480.10378479720115838No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGATCTCCCTCATTATCCCTGTGCC2410.10085538760273857No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACTACATGTGTGAGAGGGAAGGAC2410.10085538760273857No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)