FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806236

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806236
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences238956
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA200688.398198831584057No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT168737.061132593448166No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT113674.7569427007482545No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT106484.456050486281994No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG83333.4872528833760192No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA83043.475116757896851No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA81123.3947672374830513No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT55132.307119302298331No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA53332.2317916269103932No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA38911.6283332496359164No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA36141.5124123269555902No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA35701.4939988951940941No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG35641.491487972681163No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT33661.4086275297544317No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG33561.4044426588995464No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATAGGAGGAGCTGACT28931.2106831383183514No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA23951.0022765697450575No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA22230.9302967910410285No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT22190.9286228426990744No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG21680.9072800013391588No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT21520.900584207971342No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA19630.8214901488140075No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT18850.7888481561459014No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT18020.7541137280503524No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT16810.7034767907062388No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC14240.5959256097356835No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT13460.5632836170675772No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG12650.5293861631430055No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA11190.4682870486616783No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA11050.4624282294648387No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGCATTCTCTCAGGGCTG10410.43564505599357206No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGCCCCAGGTAGCAAAAC10140.4243459046853814No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC9780.4092803696077939No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCATGGTACGGCAACATATCAGAA9350.39128542493178664No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT9030.37789383819615324No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC8710.3645022514605199No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT8680.36324679020405426No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT8610.3603173806056345No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC8390.3511106647248866No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG8360.34985520346842097No Hit
CATAGATCCCATACTCCTCCATTACCCTAACCTCCCACCCCAGCTGTCTA8180.34232243592962724No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT8070.33771907798925327No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGTGTATTAATT7070.2958703694403991No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC7030.2941964210984449No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG6760.28289726979025426No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC6550.2741090409949949No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT6100.2552771221480105No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC5880.2460704062672626No Hit
CATAGAGTCCTTCCCTCTCACACATGTACACTGTCTTCAGCTCTTTGAGG5730.23979309998493448No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT5470.22891243576223236No Hit
CATAGACCACACACACAACTGAGAGTTAGAGGAGAATGATATTGTTGCAG5370.22472756490734694No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACTCTGTTTACTCGGAGATTT5280.22096118113795007No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGAAGTGTATTAATTATCTA5270.22054269405246155No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA5260.220124206966973No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGATAGCGAGAAGAGTGG5200.21761328445404177No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGAGGAGAATGATATTGTT5110.21384690068464488No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTACGATAGCGAGAAGAGTGGAGG4440.18580826595691258No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA4340.18162339510202713No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA4140.17325365339225632No Hit
CATAGAAACAGCAAAGCCCTCCACCAAGTCAGGAATCTTTGGGAGGCTAT4040.1690687825373709No Hit
CATAGACACACTGACAATTTGCACCTGTACACAGGGCAGAGAGTGTGTTG4020.16823180836639381No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT3910.16362845042601984No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT3710.15525870871624903No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3650.15274778620331778No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA3610.1510738378613636No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT3570.14939988951940944No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGGCATTCTCTCAGGGCT3440.1439595574080584No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCGTCAGTGTGGGAAAGGTATG3340.13977468655317296No Hit
CATAGACCCCCTTGAGTTCACTGGACCTCTGTTTACTCGGAGATTTGACT3300.13810073821121882No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACACTGAAGCAGAGGTAGATG3200.13391586735633337No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCGTTTTCTGTTTACTCGGA3170.13266040609986776No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA3130.1309864577579136No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA3110.1301494835869365No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT3020.12638309981753965No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT2910.12177974187716567No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTTCCCCAGGTAGCAA2900.12136125479167714No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCCCCAGGTAGCAAAACAGA2640.11048059056897504No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA2620.10964361639799797No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2550.10671420679957816No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTAGTGTCATAGGGCACTGAGAC2520.10545874554311253No Hit
CATAGAGTCCTTCCCTCTCACACATGTAGTCCTTCCACTACCCACCTGCC2510.105040258457624No Hit
CATAGATCACCAGATGCCAGTTGTGCCATAGAGGCAGGTGGGTAGAGAGT2430.10169236177371567No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTCTGTTTACTCGGAGAT2430.10169236177371567No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)