FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806243

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806243
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences217189
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA209899.663933256288301No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC140986.491120636864666No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG128315.90775775937087No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG119675.509947557196727No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC97674.497004912771826No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA81683.760779781664817No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA70603.2506250316544576No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC68083.1345970560203322No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA62512.8781383955909368No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG62272.867088112197211No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA58882.711002859260828No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG52722.4273789188218555No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT50432.321940798106718No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT45092.0760719925963103No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT40301.8555267531965247No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA37781.7394987775623996No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA33081.5230973944352615No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT31131.4333138418612361No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG21700.9991297901827441No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG18510.8522531067411333No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC17410.8016059745198882No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT17030.7841096924798218No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT16210.7463545575512572No Hit
CATAGATGGCCAAGATACGAGCACATACTGACGCTATACCACACTACACA16020.7376064165312239No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA15440.7109015649963856No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA14810.6818945710878543No Hit
CATAGATGTGTAGCCTGGGTCTGACAAGGGGTAAGGCGTACTGGTCTATG14180.6528875771793231No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC14100.6492041493814144No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG13950.6422977222603354No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG13520.622499297846576No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG11430.5262697466262104No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCACTGGCTCAGGTATGT9800.45121990524381994No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACAGATGTTCTTCCTTTTC9660.4447739065974796No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC8700.40057277302257477No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA8310.38261606250776975No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA8030.36972406521508916No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT7780.35821335334662435No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG7450.34301921368025085No Hit
CATAGATCAAGGAAAACACCAGCCCATGCAAACTGTTCTAGGCAGAAGAA6620.3048036502769477No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG6570.30250150790325475No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTCATTGCTTCTTGTGGTAACT6330.2914512245095286No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT6180.2845447973884497No Hit
CATAGAGCTTGGGCGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA5910.2721132285705077No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT5820.2679693722978604No Hit
CATAGACCAACATTTCTTCTCCCAGGGTATAGAGATCCCACCATTTGCCA5700.2624442306009973No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT5570.2564586604293956No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTCTGTCATTGTCGCTGTCCCATC5340.245868805510408No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGATCATTGTTCACTGCA5280.24310623466197645No Hit
CATAGAGAAGACTCCCTCAACCCACCATCATTGCTTCTTGTGGTAACTGG4900.22560995262190997No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT4860.22376823872295556No Hit
CATAGACCCAAGACCCCAGCCTTTACCTCATTGCTTCTTGTGGTAACTGG4780.22008481092504686No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGCTATACCACACTACAC4460.2053510997334119No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT4350.20028638651128738No Hit
CATAGACGGATTACTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC4060.18693396074386825No Hit
CATAGAGCTTTTTTTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3910.18002753362278937No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3670.16897725022906315No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG3650.168056393279586No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA3490.1606895376837685No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC3480.1602291092090299No Hit
CATAGAGAAGACTTCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG3350.15424353903742824No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG3320.15286225361321246No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT3280.15102053971425808No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACACTGACGCTATACCACACT3270.1505601112395195No Hit
CATAGACCAGCAGACACTCCCATCATTACGGTAGCAGCATAATTTCCCAT3270.1505601112395195No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT3190.14687668344161076No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA3120.14365368411844062No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT3060.14089111327000906No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA3010.1385889708963161No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2980.13720768547210035No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGTTTCCCCACTCAAATACC2980.13720768547210035No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA2840.13076168682576006No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTTGGTCTACCAGTTATTAGTTGA2650.12201354580572682No Hit
CATAGACCAGCAGACACTCCCATCATGGTTCTACACATAGAGATCCCACC2550.1174092610583409No Hit
CATAGATGTTTTACCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC2500.11510711868464793No Hit
CATAGAGTGCCTGTTTCCTCATTCGTTGTCTGTTTCCCCACTCAAATACC2450.11280497631095499No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA2390.11004240546252343No Hit
CATAGACGGATTATTCTCTCCATGGTCTATGAGCAAGGGGTAAGGCGTAC2380.10958197698778484No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT2300.1058985491898761No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC2280.10497769224039892No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTTTTTGTGCACCTTCATTGTT2280.10497769224039892No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2260.10405683529092172No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGACGATCATTGTTCACTGCAG2210.10175469291722877No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)