FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806245

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806245
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences177459
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC100875.684129855346868No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA84364.753774111203151No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA78114.401580083286843No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC73364.13391262207045No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA59323.342743957759257No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT53423.010272795406263No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA46232.6051087856913426No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA41052.3132103753543074No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA39382.2191041310950697No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG33871.9086098760840533No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT28521.607131788187694No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC24051.355242619421951No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG21551.214365008255428No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA21121.1901340591347862No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT19041.072923886644239No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG18951.0678522926422442No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC18501.0424943226322698No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT18461.0402402808536055No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA17090.963039349934351No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT16740.9433164843710379No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT16540.9320462754777159No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT15040.8475197087778021No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA14860.8373765207738125No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG14770.8323049267718177No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA14430.8131455716531707No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA14390.8108915298745063No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11890.6700139187079832No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT11760.6626882829273241No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTCTCTTCCGCCTTTATCCTTCT11610.6542356262573327No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT11350.6395843546960143No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11190.6305681875813568No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG10970.6181709577987028No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT10950.6170439369093705No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA10740.6052102175713826No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9840.5544942775514344No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC9290.5235012030947994No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC8860.4992702539741574No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA8740.4925081286381643No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC8590.48405547196817295No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG8570.48292845107884075No Hit
CATAGACCCCCATGCAACCACATCTATGAGACCCCCTTCATTTTGCTGGA8190.46151505418152927No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT7980.4496813348435413No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA7810.4401016572842178No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT7630.42995846928022813No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT7560.4260138961675655No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT7540.4248868752782332No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA7450.41981528127623846No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACTTTGTTCCCTGGCTTCTCT7350.4141801768295776No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG7320.4124896454955793No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCCGAGGGCAAGTGTATGGTCA7240.4079815619382505No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT7220.40685454104891833No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG7050.39727486348959484No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG7020.39558433215559646No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT6880.38769518593027125No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA6740.379806039704946No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA6010.33866977724432124No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6010.33866977724432124No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA5620.31669286990234363No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG5580.3144388281236793No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT5570.31387531767901317No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAGGATGACTTATGGAA5520.31105776545568276No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5180.2918984103370356No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5150.29020787900303735No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCTACCGTACAATGGGCACACTTA5040.28400926411171035No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG5030.2834457536670442No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGAACAAGGGCATGGTCAAG4910.27668362833105115No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAGTGTACAAGCACATTATTAT4630.26090533588040055No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT4600.2592148045464023No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG4560.2569607627677379No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACATCGGCCGCACTGAAATT4470.2518891687657431No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT4460.251325658321077No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTGGTGGTGCTGGAACTAGTTCTAT4420.2490716165424126No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC4410.24850810609774654No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT4320.2434365120957517No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA4270.24061895987242127No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT4250.23949193898308904No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4250.23949193898308904No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA4230.23836491809375687No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4230.23836491809375687No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT4200.2366743867597586No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC3950.2225866256431063No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT3940.2220231151984402No Hit
CATAGACAGAACACCACACCCCTGTCACACTGACGACAATGGGCACACTT3810.21469747941778103No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC3800.21413396897311493No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC3780.21300694808378276No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3640.20511780185845743No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTACTTGCTCTCTTCCGCCTTT3590.202300249635127No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3560.20060971830112873No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCCTCCTACAATCCTGGCAAAAGGGT3540.19948269741179656No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGGTGGTGCTGGAACTAGTTCTA3510.19779216607779823No Hit
CATAGACAGTATGGGGGAAACGGCTCGTCGTGTGATCTAGCTTCGGAATG3490.19666514518846606No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC3490.19666514518846606No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC3270.18426791540581205No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCCAAGTATATGACACATTAC3150.17750579006981895No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA3070.17299770651249022No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGGGCAAGTGTATGGTCAGTTCT2880.16229100806383448No Hit
CATAGAGGGAAGAGAAGAGGAGCTGGTGGTGCTGGAACTAGTTCTATGAG2820.15890994539583791No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGCCCTGTGATTGTCCTGGTCTAT2820.15890994539583791No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTGGGGGAAGAGAAACAGAATC2730.15383835139384308No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC2680.15102079917051262No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2560.1442586738345195No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGCATAGACCCCCTTTACCTACCT2530.14256814250052124No Hit
CATAGATCATGAATGACTCCCACTCTGAGGTTCTTCAACACAGCTATTCT2520.14200463205585517No Hit
CATAGAAAAGTCACCATGCAGCCCTGAAGTCACCACAGCCCAGTTTTCCT2520.14200463205585517No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGCAAAAGGGTAAGAGTTCTATG2430.1369330380538603No Hit
CATAGAGCATCCTCGTAATAGCAAACATTCCAACTCTATAGATTATGCTC2420.13636952760919424No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2400.13524250671986204No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2360.13298846494119768No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCTTAGGAGTTCTGGCC2350.1324249544965316No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC2340.1318614440518655No Hit
CATAGACAGTATGGGGGAAACGGCTCGTCAGTGTAGTCACTCAAATATAG2280.12848038138386894No Hit
CATAGAGCAGTGCAGCAGAAGATAGCGCCATTGTACTCCAGTCTCGGCAA2220.1250993187158724No Hit
CATAGATGTGTGAGAGAGGGAGAGACAATGGGCACACTTAACACCTCTAT2180.12284527693720802No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAGCATGAGAAGAATGGCCT2180.12284527693720802No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT2170.12228176649254194No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT2140.12059123515854367No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG2090.1177736829352132No Hit
CATAGAAAAGTCACCATGCAGCCCTGTCACCACAGCCCAGTTTTCCTTCT2080.11721017249054712No Hit
CATAGATCATGAATGACTCCCACTCTGGGCCCATAATACACTTTTCTATG2070.116646662045881No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGAGGGCAAGTGTATGGTCAGTT2030.11439262026721665No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGAACAAGGGCAT2030.11439262026721665No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTGGTGAAAAGTAGGGGAC1920.10819400537588963No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAACAAGCACATTATTATTGG1860.10481294270789308No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)