FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806246

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806246
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences177459
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG103045.806411621839411No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT84454.758845705205146No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT77414.362134352160217No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG70643.980637781121273No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT57763.2548363283913466No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT52422.953921750939654No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT45842.583131878349365No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT41582.34307642892161No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT38672.1790948895237774No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG34031.9176260431987107No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT32611.8376075600561255No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG21131.1906975695794522No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT20491.1546329011208223No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT19081.0751779284229035No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG18721.054891552414924No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG18551.0453118748556005No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC18031.0160093317329637No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT17090.963039349934351No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT16490.9292287232543855No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT16410.9247206396970569No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG14800.833995458105816No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT14790.8334319476611498No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC14570.8210347178784959No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT14520.8182171656551653No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA14450.8142725925425028No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT14300.8058199358725114No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG12930.7286190049532568No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT11800.6649423247059885No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATTCTTTCTCCAGACCTTCATCT11540.6502910531446701No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG11140.6277506353580263No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC10930.6159169160200384No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC10800.6085912802393793No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT10770.606900748905381No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG10680.6018291549033861No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC10040.5657644864447563No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC9230.5201201404268028No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC8560.4823649406341747No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC8510.47954738841084416No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC8480.4778568570768459No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT8290.4671501586281902No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGTCTCATAGATGTGGTTGCATGGG8050.453625907956204No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT7960.44855431395420914No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT7650.4310854901695603No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC7560.4260138961675655No Hit
CATAGAGGCCATTCTTCTCATGCTGGCATTCTTTCTCCAGACCTTCATCT7550.4254503857228994No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT7490.4220693230549028No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT7320.4124896454955793No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTAGAATCTTGAACTCAGGAGTCT7250.4085450723829166No Hit
CATAGAACTGACCATACACTTGCCCTCGGGTCTAGGATGAGATAATTGCC7230.4074180514935844No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTAGGATGAGATAATTGCC7080.3989653948235931No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG7050.39727486348959484No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA7040.39671135304492866No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7030.39614784260026253No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT6830.3848776337069407No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT6720.3786790188156137No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA6060.3414873294676517No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA5800.3268360579063333No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG5580.3144388281236793No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGCATTCTTTCTCCA5510.31049425501101663No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA5500.3099307445663505No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT5160.2907713894477034No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG5040.28400926411171035No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5020.28288224322237815No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACGGTAGCAGTTAGGCTACTTGG4920.2772471387757172No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA4820.2716120343290563No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGCCAAGTAAGTCTAC4620.2603418254357344No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC4470.2518891687657431No Hit
CATAGAACTAGTTCCAGCACCACCAGAACTTTCCCACCGCCCTTTTCTAT4460.251325658321077No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC4430.2496351269870787No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4410.24850810609774654No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTTGCAGGATGAATGGGGAC4390.24738108520841437No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT4360.24569055387441605No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT4340.24456353298508388No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT4330.24400002254041778No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4260.2400554494277551No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT4230.23836491809375687No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC4220.23780140764909077No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT4130.23272981364709594No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT4120.23216630320242984No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG4110.23160279275776374No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA3830.2158245003071132No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCCAAGTAAGTCT3820.2152609898624471No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGACAGGGGTGTGGT3560.20060971830112873No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3510.19779216607779823No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAAGTAAAGCAGCAAACAATTTCA3500.19722865563313213No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3480.19610163474379996No Hit
CATAGATGAAAACATTCCGAAGCTAGATCACACGACGAGCCGTTTCCCCC3460.1949746138544678No Hit
CATAGAACTCTTACCCTTTTGCCAGGATTGTAGGAGGCTAACTTCGCCTG3460.1949746138544678No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA3450.1944111034098017No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG3320.18708546762914252No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT3120.17581525873582066No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG3110.17525174829115456No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTACGGTAGGTGGCTTCTG3010.16961664384449365No Hit
CATAGAACTGACCATACACTTGCCCTGACACTTGAAAGCTCCCTGGATCT2890.16285451850850055No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT2790.15721941406183965No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCCTCTTCTCTTCCCTCTATGTG2790.15721941406183965No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATGTTTGCTATTACGAGGATGCTC2710.1527113305045109No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT2600.14651271561318388No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACTTCAGGGCTGCATGGTGACT2600.14651271561318388No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT2510.14144112161118907No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2500.14087761116652298No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGTCTATGCCCACCTAAACTCCT2470.1391870798325247No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT2440.1374965484985264No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG2410.13580601716452814No Hit
CATAGACAGGGGCCAGAACTCCTAAGGTCTCATAGACAGGGGTGTGGTGT2320.13073442316253334No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGTTTGCTATTACGAGGA2320.13073442316253334No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2270.12791687093920287No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA2250.12678985004987067No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCTCCCTCTCTCACACATCTAT2250.12678985004987067No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACACTGACGAGCCGTTTCC2230.1256628291605385No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT2190.12340878738187411No Hit
CATAGAGGCCATTCTTCTCATGCTGGTACGGTAGGTGGCTTCTGGTGCAT2160.12171825604787585No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA2150.12115474560320975No Hit
CATAGACTTGTTGCCGAGACTGGAGTACAATGGCGCTATCTTCTGCTGCA2140.12059123515854367No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG2110.11890070382454539No Hit
CATAGAACTGACCATACACTTGCCCTCTGCTTTTACAAACTCAAGTGATT2110.11890070382454539No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACAGGGCTGCATGGTGACTTTT2100.1183371933798793No Hit
CATAGAAAAGTGTATTATGGGCCCAGAGTGGGAGTCATTCATGATCTATG2080.11721017249054712No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2070.116646662045881No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGGTCTCATAGACACTTGAAAG1980.1115750680438862No Hit
CATAGAACTGTCCCCTACTTTTCACCACACTGAACGAAATTTAGGTGAGC1950.10988453670988793No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTACGGTTGCAGGATGAATGG1880.10593996359722527No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)