FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806247

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806247
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144448
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC106147.347972972972973No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC84395.8422408063801505No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA79275.487787992910944No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA75135.201179663269827No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT48613.3652248560035445No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA40602.8107000443066017No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA39822.756701373504652No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA37552.599551395657953No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT36912.5552447939743024No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA34692.401556269384138No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT32812.271405626938414No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA25011.7314189189189189No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC24871.7217268498006204No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG16731.1582022596366859No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT16711.1568176783340718No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC14961.035666814355339No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC14941.0342822330527248No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA12950.8965163934426229No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT12640.8750553832521046No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA12570.8702093486929553No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC12440.8612095702259636No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG11820.8182875498449269No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11620.8044417368187861No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG11540.7989034116083297No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA11460.7933650863978733No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT11190.7746732388125831No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG10290.7123670801949491No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA9680.6701373504652194No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT9110.6306767833407178No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT8870.6140618077093487No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG8280.5732166592822331No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG8200.5676783340717767No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTTTTTGAGATGGAGTCTCACT8010.5545248116969428No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA8000.5538325210456359No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA7810.5406789986708019No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT7680.5316792202038104No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT7610.5268331856446611No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA7440.5150642445724413No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC6650.46037328311918474No Hit
CATAGATGCACCAGAAGCCACCTACCTGGCAAAAGGGTAAGAGTTCTATG6570.4548349579087284No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC6570.4548349579087284No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG6500.44998892334957913No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTTAAGCAACTCTCCTGGGCCTCT6440.4458351794417368No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA6390.44237372618520165No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTTTGCCAAGATTGTAGGAGTAG6320.4375276916260523No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCACCCTGGTGGTGCTGGAACTAG6320.4375276916260523No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT6300.43614311032343817No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA5480.3793752769162605No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTGGTGGTGCTGGAACTAG5130.355145104120514No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG5090.3523759415152858No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA4980.3447607443509083No Hit
CATAGATGCACCAGAAGCCACCTACCGTAACAATGGGCACACTTAACACC4820.3336840939299956No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT4730.32745347806823216No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA4710.32606889676561807No Hit
CATAGAGAAAGGCAGGCGAAGTTAGCAGAGGTAGAACACGAGGCGTGTTC4640.3212228622064688No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG4560.3156845369960124No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG4330.29976185201595035No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGGATGACTTATGGAATCTGAA4320.29906956136464335No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTTAGGAGTTCTGGCCCCT4070.2817622950819672No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA3990.2762239698715108No Hit
CATAGAGACCCCCAAGTAGCCTAACTGAGGTTCTTCAACACAGCTATTCT3790.2623781568453699No Hit
CATAGACAGTCCTGCCGTGTACATGTCTGGTGGTGCTGGAACTAGTTCTA3780.2616858661940629No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGACATGGTGAAAAGTAGGGGACA3510.2429940186087727No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGAACAAGGGCATGGTCAAGTGT3450.23884027470093042No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA3420.2367634027470093No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT3400.2353788214443952No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT3390.23468653079308818No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC3260.22568675232609658No Hit
CATAGATGCACCAGAAGCCACCTACCCCTTTACCTACCTTCTCAGCTCTA3260.22568675232609658No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA3180.2201484271156402No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT3110.2153023925564909No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3100.21461010190518387No Hit
CATAGACCATGTAATACCATCGTGAGCAGGGCAAGTGTATGGTCAGTTCT3060.21184093929995568No Hit
CATAGATCTGGGAGGTGAAGAGGACACTGGGAGGAACAGGGAGATGTTCT2990.20699490474080637No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2920.20214887018165706No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2800.1938413823659725No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA2760.19107221976074434No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA2750.1903799291094373No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2740.18968763845813025No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCACACTGACGACAAGGTTTTCC2700.18691847585290208No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC2700.18691847585290208No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA2650.18345702259636687No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT2570.1779186973859105No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA2560.17722640673460346No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA2320.1606114311032344No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG2220.15368852459016394No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT2210.1529962339388569No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2160.14953478068232168No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT2130.14745790872840053No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCCATCAGAGCATCACCCCTT2100.14538103677447942No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT2000.13845813026140896No Hit
CATAGAATTGCCTACTTTGGGACCCACCCGTAATCCCTCCCTTTTCTATG1960.13568896765618077No Hit
CATAGACCCCCATGCAACCACATCTATGAGACCAAGTCGTGTACAGCCTA1920.1329198050509526No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1890.13084293309703146No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTCCATCAGAGCATCACCC1860.12876606114311032No Hit
CATAGAGACCCCCAAGTAGCCTAACTGACACTGACGACAATGGGCACACT1850.12807377049180327No Hit
CATAGACAGAACACCACACCCCTGTCCACAGCCCAGTTTTCCTTCTCTAT1730.11976628267611875No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCGTAAAGGTTTTCCGGC1700.1176894107221976No Hit
CATAGACAGAACACCACACCCCTGTCTACTTAGGAGTTCTGGCCCCTGTC1630.11284337616304829No Hit
CATAGATTTGGCACTCACATACACGCCTGTTTCAGGGATTCATGTAAATT1610.1114587948604342No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT1580.10938192290651308No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT1560.10799734160389898No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACTGTTCTCAGAGGCTGAACC1520.10522817899867079No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1510.10453588834736374No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA1510.10453588834736374No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT1480.10245901639344263No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)