FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences144448
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG110977.682349357554276No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG84215.829779574656624No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT79295.4891725742135575No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT76335.284254541426672No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT47853.3126107665042093No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT44963.112538768276473No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT40112.7767778023925564No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT39672.7463170137350468No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT36782.5462450155073104No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT34232.3697108994240144No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT32252.232637350465219No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG25301.7514953478068231No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT24871.7217268498006204No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG16801.1630482941958353No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT16761.160279131590607No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC14581.0093597696056713No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13130.9089776251661498No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC12940.8958241027913159No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT12600.8722862206468763No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT12320.8529020824102791No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12170.8425177226406735No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG11880.8224412937527691No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG11520.7975188303057155No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT11440.7919805050952591No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT11140.7712117855560479No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG10340.7158285334514842No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT9740.6742910943730616No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9010.6237538768276474No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA8710.6029851572884359No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG8350.5780626938413824No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG8140.5635245901639344No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT8020.5552171023482498No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA7980.5524479397430216No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTACTGGGGTATGTGGCACTCCAG7910.5476019051838724No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT7690.5323715108551174No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT7600.526140894993354No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG7390.5116027913159061No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC6660.4610655737704918No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT6620.4582964111652636No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC6620.4582964111652636No Hit
CATAGAGGCCCAGGAGAGTTGCTTAAGACACTTGAAAGCTCCCTGGATCT6540.4527580859548072No Hit
CATAGAACTAGTTCCAGCACCACCAGGGTGCATTCTTTCTCCAGACCTTC6490.4492966326982721No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAGGTGGCTTCTGGTGCATCTATG6490.4492966326982721No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC6490.4492966326982721No Hit
CATAGATCTACTCCTACAATCTTGGCAAAGCATTCTTTCTCCAGACCTTC6370.4409891448825875No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC6090.42160500664599027No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA5590.386990474080638No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC5150.356529685423128No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG5090.3523759415152858No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4890.3385301284891449No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC4810.3329918032786885No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTAAATCTCCTACCTACAGTCAGGC4810.3329918032786885No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT4770.33022264067346035No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT4730.32745347806823216No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTACGGTAGGTGGCTTCTGGTGCA4720.3267611874169251No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG4400.3046078865750997No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGGTGGCTTCTGGTG4390.30391559592379264No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC4140.28660832964111654No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4010.2776085511741249No Hit
CATAGAACTAGTTCCAGCACCACCAGACATGTACACGGCAGGACTGTCTA3890.2693010633584404No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTTAGGCTACTTGGGGGTCTCT3580.24784005316792201No Hit
CATAGAACTGTCCCCTACTTTTCACCATGTCAGGAGTTGACAAACGACAG3550.2457631812140009No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3450.23884027470093042No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT3400.2353788214443952No Hit
CATAGACACTTGACCATGCCCTTGTTCTGACACTTGAAAGCTCCCTGGAT3390.23468653079308818No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3350.23191736818786No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT3230.22360988037217547No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA3220.2229175897208684No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA3180.2201484271156402No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT3170.21945613646433318No Hit
CATAGAACTGACCATACACTTGCCCTGCTCACGATGGTATTACATGGTCT3120.21599468320779797No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTGTCCTCTTCACCTCCCAGATCT3110.2153023925564909No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3010.20837948604342046No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2880.19937970757642887No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2830.19591825431989365No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2800.1938413823659725No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2780.19245680106335844No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2780.19245680106335844No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA2690.18622618520159503No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA2580.17861098803721753No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT2550.17653411608329642No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG2250.15576539654408508No Hit
CATAGAACTGTCCCCTACTTTTCACCAGGGCTGCATGGTGACTTTTCTAT2240.15507310589277803No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC2210.1529962339388569No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT2150.14884249003101463No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2110.14607332742578644No Hit
CATAGAAGGGGTGATGCTCTGATGGATGCTCTGAGGAAGTGACATGCCAT2080.14399645547186532No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2050.14191958351794418No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCCAAGTAAGTCT2040.14122729286663713No Hit
CATAGATGAGGGATGTAGGCTGTACACGACTTGGTCTCATAGATGTGGTT1880.1301506424457244No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTCAGTTAGGCTACTT1880.1301506424457244No Hit
CATAGAAGGGGTGATGCTCTGATGGACACTGAACGAAATTTAGGTGAGCA1860.12876606114311032No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1850.12807377049180327No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTCCCAAAGTAGGCAATTCTATG1850.12807377049180327No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACAGGGGTGTGGTGTTCTGTCTAT1700.1176894107221976No Hit
CATAGACGTGTGGTTGGGATGTCAGCCGGCAGCCCCTAGAAGATTGGATC1690.11699712007089055No Hit
CATAGAACCTCAAGCCGGAAAACCTTTACGGTAGCAGACACTTGAAAGCT1680.1163048294195835No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1660.11492024811696944No Hit
CATAGACAGGGGCCAGAACTCCTAAGTAGACAGGGGTGTGGTGTTCTGTC1630.11284337616304829No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT1610.1114587948604342No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC1570.10868963225520603No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT1560.10799734160389898No Hit
CATAGAACTGACCATACACTTGCCCTTTGGAGATTAGACTCATGGAGGAG1530.10592046964997784No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT1530.10592046964997784No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1470.10176672574213558No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1450.10038214443952148No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)