FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39117
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT37039.46647237773858No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA32298.254723010455812No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA28657.324181302247104No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT26736.833346115499656No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC23295.95393307257714No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG19925.092415062504793No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC17114.374057315233785No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT16354.179768387146254No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG13593.474192806196794No Hit
CATAGAGAGATTTTGGGCTGAGACGACACTGATCTATCCAGGAATTTTAT12193.1162921491934457No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA11953.054937750850014No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA8332.1295089091699264No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA5691.4546105273921826No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC4871.2449829997187922No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA4231.0813712708029757No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG3680.9407674412659458No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG3460.8845259094511337No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACA2700.6902369813636015No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2480.6339954495487896No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCCAATGGGCA2190.5598588848838101No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA1970.5036173530689981No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA1870.47805302042590175No Hit
CATAGAGGATCCCATCTGAGTTGGTCGTGTGGAGACAGCCGCTCACCTCT1700.43459365493263796No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT1620.4141421888181609No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGACTTCCTCATGCTAATCCA1610.41158575555385124No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGCAATGGGCAAG1560.3988035892323031No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA1540.3936907227036838No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG1500.38346498964644526No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1270.32466702456732366No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA1200.30677199171715624No Hit
CATAGACAGAAACCACCCAGACAACCGCTCACCTCTATGAGACCAAGTCT1180.301659125188537No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1170.29910269192422734No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAACAATGGGCAAGCAATGACAGT1080.2760947925454406No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT1040.26586905948820205No Hit
CATAGAGCTGGCTTCCTAACTTCCAACTGCCTTCCTAACCATGGGCATAT1020.2607561929595828No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1020.2607561929595828No Hit
CATAGATTGGAACTTTGCCAGCCTTACACTGACGACATGGTTCTACACAT960.24541759337372496No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTTCTGTTATTCAAAGGTTTTC940.2403047268451057No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCACCTGATTGGCCA880.2249661272592479No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA860.21985326073062864No Hit
CATAGATCATGGGACTTCAGCATGGCAAGCAATGGGGAAAGGATTCTATG790.2019582278804612No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAGAGCTGCCTTCCTAACCATGGG780.19940179461615154No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG780.19940179461615154No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA770.1968453613518419No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG770.1968453613518419No Hit
CATAGAGCAACAGGGACTCTCATTCAACACTGACTGATACAGGAAGGCCT740.189176061558913No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT690.17639389523736482No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAAGCAATGGGGAAAGGATTC670.17128102870874556No Hit
CATAGAGGATCCCATCTGAGTTGGTGATGCATCTATGAGACCAAGTCAAT650.16616816218012628No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT640.16361172891581666No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGCAATGGGGAAAGGATTCTAT580.14827312932995884No Hit
CATAGATCATGGGACTTCAGCATGGCTTCCTAACCATGGGCATATCTATG580.14827312932995884No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCTTCTGCTGGCTATTCTATG510.1303780964797914No Hit
CATAGATCATGGGACTTCAGCATGGCCTTCCTAACCATGGGCATATCTAT490.12526522995117215No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT460.11759593015824323No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGAGACAGCCGCTCAC450.11503949689393358No Hit
CATAGATCATGGGACTTCAGCATGGACAAGCAATGGGGAAAGGATTCTAT430.10992663036531432No Hit
CATAGATCCCATCCAATAATAATGAGCAACAAGCAATGGGGAAAGGATTC430.10992663036531432No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCAAAATGGTCAAACAGGAGGTCTA400.10225733057238541No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGGAGACAGCCGCTCACCT400.10225733057238541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)