FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806257

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806257
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences76381
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1165415.25772116102172No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA43655.7147719982718215No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG35944.705358662494599No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA34614.531231589007738No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG29493.8609078173891413No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA21932.8711328733585577No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT20772.7192626438512195No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT15462.0240635760202146No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA14621.9140885822390385No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA14311.8735025726293189No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA13661.7884028750605518No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC11291.4781162854636625No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG10921.4296749191552873No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT9521.2463832628533273No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA9021.1809219570311988No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8971.174375826448986No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC8391.098440711695317No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7721.0107225618936646No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT7270.951807386653749No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7230.9465704821879787No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG7090.9282413165577827No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT6750.8837276285987353No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG6620.8667076890849819No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGATAGAACAGCTAAAAATC6500.850996975687671No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6020.7881541220984276No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTACTCTCAGTTGTGTGTGT5820.7619695997695762No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATTACTCTCAGTTGTGTGTG4740.6205731791937785No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACAGTGAAACAAGATC4710.6166455008444508No Hit
CATAGACTCTGTTTTGCTACCTGGGGCACATAGAACAGCTAAAAATCTTG4700.6153362747280082No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGACGACATGTGTGAGAGGGAAGG4600.6022440135635826No Hit
CATAGACTCTGTTTTGCTACCTGGGGTACACATAGAGAACAGCTAAAAAT4310.564276456186748No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC3950.5171443159948155No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA3470.45430146240557207No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA3460.4529922362891295No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3440.45037378405624434No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC3100.4058600960971969No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT3030.39669551328209895No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA2930.38360325211767327No Hit
CATAGAATACAACACACTCTCTGCCCTGGACATGTGTGAGAGGGAAGGAC2820.36920176483680495No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2730.35741872978882183No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG2720.35610950367237926No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC2690.35218182532305153No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCACGGAGATAGAG2630.3443264686243961No Hit
CATAGACTCTGTTTTGCTACCTGGGGATAGAACAGCTAAAAATCTTGGAG2550.33385265969285555No Hit
CATAGAGAACAGCCCTGAGAGAATGCATGGTTCTACACATAGAGAACAGC2440.3194511724119873No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG2430.3181419462955447No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2400.314214267946217No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGTAGGGTGGGGAAAGAGAGC2340.3063589112475616No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2340.3063589112475616No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA2310.30243123289823387No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2290.2998127806653487No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2280.29850355454890615No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCCCTCTAACTTCATAGC2220.2906481978502507No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT2170.28410206726803783No Hit
CATAGATGCTTCTGATATGTTGCCGTTGTTGCCTTTCCTCAGTTCTTTTT2150.2814836150351527No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGGAGACAGCCGCTCAC1980.259226771055629No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1970.25791754493918645No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1950.2552990927063013No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT1940.2539898665898587No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1930.25268064047341615No Hit
CATAGAGGCATAGTATTGAAACTGTAGATCACTCTAGGCTGAGAAAGGAG1920.2513714143569736No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA1870.24482528377476076No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTACCGTAGGAGAGGAGGG1850.2422068315418756No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1850.2422068315418756No Hit
CATAGAACAGTAAGTCAGCTCCTCCTAACTTAGCAACCTGTACATTTCGT1840.24089760542543304No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA1780.2330422487267776No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG1760.23042379649389244No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1740.22780534426100732No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1710.2238776659116796No Hit
CATAGACCACCGTGCCCAGATAAGTTACGGTTGCCTTTCCTCAGTTCTTT1680.21994998756235187No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA1670.21864076144590935No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1660.21733153532946678No Hit
CATAGATGATCCATCTACCTCTGCTTCATCCATCTACCTCTAACTTCATA1630.21340385698013906No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1620.21209463086369648No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGGCTGAGAAAGGAGGATCACTCT1610.2107854047472539No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACATGTGTGAGAGGGAAGGAC1510.1976931435828282No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG1490.19507469134994307No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1440.1885285607677302No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1430.18721933465128762No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1380.18067320406907478No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1380.18067320406907478No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1280.16758094290464906No Hit
CATAGAGAACAGCCCTGAGAGAATGGTTCTACACATAGAGAACAGCTAAA1270.1662717167882065No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT1150.15056100339089565No Hit
CATAGATGATCCATCTACCTCTGCTTCATCTACCTCTAACTTCATAGCAC1110.14532409892512535No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1060.1387779683429125No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACGGACTACAAGTACCCAC1010.13223183776069966No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGTGTGAGAGGG880.11521189824694622No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACATGTGTGAGAGGGAAGGACT870.11390267213050366No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGTGAAACAAGATCGTGCCTCT840.10997499378117594No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)