FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806267

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806267
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130467
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT106608.170648516483094No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA77815.96396023515525No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG76335.850521587834471No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA63084.8349391033748No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA54794.1995293829090885No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA51173.9220645833812378No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG44933.44378271900174No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA30762.3576843186399623No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT29752.2802701066169986No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG27312.093249634007067No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA21721.6647887971670998No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG19241.4747024151701196No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA18641.4287137743643987No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA18431.4126177500823962No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA17751.3604972905025792No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT16791.2869154652134256No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC14181.0868648777085392No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG14151.0845654456682534No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA12690.9726597530409988No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT10240.7848728030843047No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT10220.7833398483907807No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC8670.6645358596426683No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTAGGGTAATGGAGGAGTA8640.6622364276023822No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT8620.6607034729088581No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA8570.6568710861750481No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT8450.6476733580139039No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC7740.5932534663938007No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA7620.5840557382326566No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA7550.5786903968053224No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6930.5311688013060774No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT6200.47521595499245023No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA5330.4085324258241547No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG5300.4062329937838687No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5290.4054665164371067No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA5250.40240060705005865No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACAGTGAAACAAGATC5090.3901369695018664No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT4780.3663761717522439No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4750.3640767397119578No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG4630.3548790115508136No Hit
CATAGAAGTGACCCTCAGCTCAGTGATCCAGGTGCAAATTGTCAGTGTGT4570.3502801474702415No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTAATGGAGGAGTATGGGATCTA4450.34108241930909733No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA4410.33801650992204924No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG4030.3088903707450926No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTAGAACAGCTAAAAATC3990.30582446135804453No Hit
CATAGAAGGAGCTGGACTGGATGGACTCTACATGTGTGAGAGGGAAGGAC3880.29739321054366236No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3720.2851295729954701No Hit
CATAGATGCTTCTGATATGTTGCCGTAGAACAGCTAAAAATCTTGGAGCT3640.278997754221374No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG3630.27823127687461197No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTAGACCAAAGCTAGAAACTCC3620.27746479952784997No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG3530.27056650340699184No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3450.26443468463289566No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG3390.25983582055232357No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT3380.2590693432055616No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCCTGTTCACTCTGATGGTA3340.2560034338185135No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT3270.2506380923911794No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG3130.23990740953651113No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCCCTCATTATCCCTGTGCCTC3060.23454206810917702No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT3020.23147615872212896No Hit
CATAGACTCTGTTTTGCTACCTGGGGATTTACTGACATGGGCAATTCGTC2960.22687729464155687No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC2910.22304490790774678No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGATGCTCAGATCTCAAAA2900.22227843056098476No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2840.21767956648041267No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2830.21691308913365065No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTCTTGTAGAAGGGATGGTCT2820.21614661178688865No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGACATGTGTGAGAGGGAAGGAC2730.2092483156660305No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2700.20694888362574443No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGACAGTGAAACAAGATCGTGCC2670.20464945158545836No Hit
CATAGAAGTGACCCTCAGCTCAGTGATTGGGGATGGCTGGTTGAATCTAT2660.2038829742386964No Hit
CATAGATGCTTCTGATATGTTGCCGTATGCCTCTTGTAGAAGGGATGGTC2630.20158354219841032No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTAGATGCTCAGATCTCAAAAGG2520.19315229138402815No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACGGAGATAGAGAGGTTGGTT2520.19315229138402815No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG2480.19008638199698008No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC2460.18855342730345603No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTAGAACAGCTAAAAATCTTGG2390.18318808587612195No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA2390.18318808587612195No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTCTACACATAGAACAGC2310.1770562671020258No Hit
CATAGAGCCTCCACTCTTCTCGCTATCTATGCAGCAACAAAAGTCACTCC2270.17399035771497773No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2220.17015797098116767No Hit
CATAGACAGCTGGGGTGGGAGGTTAGTTACAGGTGCAAATTGTCAGTGTG2200.16862501628764362No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCCAGATCCTTGTCAACTCTTG2150.16479262955383353No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGATGGTGCCTCTTGTAGAAGGGAT2140.16402615220707153No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2100.16096024282002344No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG2080.15942728812649942No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA2080.15942728812649942No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG2010.15406194669916531No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGACCAAAGCTAGAAACTCCC1980.15176251465887927No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTAGGGTGGGGAAAGAGAGCAC1980.15176251465887927No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGTGTGAG1960.15022955996535522No Hit
CATAGATGCTTCTGATATGTTGCCGTACATAGATGCTCAGATCTCAAAAG1960.15022955996535522No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGCCTCTTGTAGAAGGGATGG1920.14716365057830716No Hit
CATAGATGATCCATCTACCTCTGCTTCACACGGACTACAAGTACCCACCA1910.14639717323154514No Hit
CATAGACTCTGTTTTGCTACCTGGGGAACATAGAACAGCTAAAAATCTTG1910.14639717323154514No Hit
CATAGACCAGCAGTTCTACTCCTAGATATACAGGTGCAAATTGTCAGTGT1900.14563069588478314No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1890.14486421853802112No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT1890.14486421853802112No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT1880.1440977411912591No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCATAGATGCTCAGATCTCA1880.1440977411912591No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGGTCATTCTTCTCTGGGG1870.14333126384449707No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG1860.14256478649773505No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT1840.14103183180421103No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG1800.13796592241716296No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCACATCTACAAGGACACTCATCT1730.13260058098982885No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATCCTTGGAGAGAAATGC1730.13260058098982885No Hit
CATAGACTCTGTTTTGCTACCTGGGGATACTCTCAGTTGTGTGTGTGGTC1710.1310676262963048No Hit
CATAGACCCCATGTGCAGTGTAAGCTCACATAGAACAGCTAAAAATCTTG1700.13030114894954278No Hit
CATAGACCTGTGTGTGAGGCATTGTTGATCTCCCTCATTATCCCTGTGCC1640.1257022848689707No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATAGAGAACAGCTAAAAATCTT1630.12493580752220869No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGGGTGGGGAAAGAGAGCA1630.12493580752220869No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1590.12186989813516061No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA1580.1211034207883986No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT1550.11880398874811256No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA1550.11880398874811256No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGCACAACTGGCATCTGGTGATCTAT1540.11803751140135052No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTGTAGTTGCCTTTCCTC1520.1165045567078265No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCGAGGCAGAGGACAGGTATCT1500.11497160201430247No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGAACATTAGCTTAGTTAATT1480.11343864732077844No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGATGCTCAGATCTCAAAAGG1450.11113921528049238No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG1410.10807330589344433No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGACTACAAGTACCCACCACCTCT1340.1027079644661102No Hit
CATAGATGTGCCACATACCTTTCCCATCTATGAGACCAAAGCTAGAAACT1330.1019414871193482No Hit
CATAGATGCCTCAAAGAGCTGAAGACACAGGGTGGGGAAAGAGAGCACTC1330.1019414871193482No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)