FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806268

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806268
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130467
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT104277.992059294687545No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA77175.914905684962481No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA74905.740915327247503No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA63334.85410103704385No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT54444.172702675772418No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT51283.93049583419562No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG44723.4276866947197373No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA30492.336989430277388No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT28322.1706638460300307No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG27172.082518951152399No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA21671.6609564104332897No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG19061.4609058229284033No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA18201.39498877110687No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA18191.3942222937601079No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT17291.3252393325515266No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT16701.2800171690925675No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA14121.0822660136279674No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG13741.0531398744510105No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA12580.9642285022266167No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT10270.7871722351245909No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT10130.7764415522699227No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT8680.6653023369894303No Hit
CATAGATCCCATACTCCTCCATTACCCTACTTTTCTAATCAATAGTACCC8620.6607034729088581No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT8450.6476733580139039No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC8420.6453739259736179No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT8240.6315773337319016No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC7650.5863551702729426No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA7530.5771574421117984No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA7490.5740915327247503No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT6840.5242705051852192No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT6200.47521595499245023No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTGTTTACTCGGAGATTTGACTGT5270.4039335617435827No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG5260.40316708439682064No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA5250.40240060705005865No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5160.39550231092920046No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG4910.37634037726015007No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC4830.37020855848605394No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCAGCTCTTTGAGGCATCTAT4770.36560969440548186No Hit
CATAGACACACTGACAATTTGCACCTGGATCACTGAGCTGAGGGTCACTT4610.3533460568572896No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT4510.3456812833896694No Hit
CATAGATCCCATACTCCTCCATTACCCTAACCTCCCACCCCAGCTGTCTA4470.3426153740026213No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA4360.33418412318823915No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC3990.30582446135804453No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAAGAAGTGTATTAATTATCTA3940.3019920746242345No Hit
CATAGAGTCCTTCCCTCTCACACATGTAGAGTCCATCCAGTCCAGCTCCT3820.29279434646309027No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3780.28972843707604223No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT3650.279764231568136No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG3600.2759318448343259No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA3570.2736324127940399No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAAGGAATCTTTGGGAGGCTATT3520.2698000260602298No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3500.26826707136670574No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG3340.2560034338185135No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT3310.25370400177822744No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT3230.2475721830041313No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG3150.24144036423003518No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGATAGCGAGAAGAGTGGAG3140.24067388688327318No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT3050.23377559076241503No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAATCTTTGGGAGGCTATTAGTC3040.233009113415653No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCATAGACCTTTTTCTGTAGTCAA2920.22381138525450878No Hit
CATAGACGAATTGCCCATGTCAGTAAATCCCCAGGTAGCAAAACAGAGTC2910.22304490790774678No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT2880.22074547586746074No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT2820.21614661178688865No Hit
CATAGACCATCCCTTCTACAAGAGGCAACCAAAATGTCAGGGGATCCTCT2810.2153801344401266No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2780.2130807023998406No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTACCCCAGGTAGCAAAACAGAG2690.20618240627898243No Hit
CATAGACCATCCCTTCTACAAGAGGCATACGGCAACATATCAGAAGCATC2650.20311649689193434No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2640.20235001954517234No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGAGGAGCTGACTTACTGT2600.1992841101581243No Hit
CATAGATTCAACCAGCCATCCCCAATCACTGAGCTGAGGGTCACTTCTAT2550.19545172342431422No Hit
CATAGAACCAACCTCTCTATCTCCGTAGGAATCTTTGGGAGGCTATTAGT2470.18931990465021808No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC2440.18702047260993201No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTAAGGAAACATTGGAAAGATGG2420.18548751791640797No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACTACGGCAACATATCAGAAG2410.18472104056964597No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC2410.18472104056964597No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA2400.18395456322288395No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAAGAAGTGTATTA2310.1770562671020258No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGATAGCGAGAAGAGTGGAGGC2250.1724574030214537No Hit
CATAGACACACTGACAATTTGCACCTGTAACTAACCTCCCACCCCAGCTG2170.16632558424735758No Hit
CATAGACCATCCCTTCTACAAGAGGCACCATCCCTTCCACTACCCACCTG2170.16632558424735758No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAAACATTGGAAAGATGGGG2120.1624931975135475No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2120.1624931975135475No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT2060.1578943334329754No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2040.15636137873945136No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTACGATAGCGAGAAGAGTGGAGG2020.1548284240459273No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGACCTTTTTCTGTAGTCAAGTGA1990.15252899200564127No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTACGGCAACATATCAGAA1970.15099603731211725No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA1960.15022955996535522No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1960.15022955996535522No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGGAGGAGAATGATATTGTT1940.14869660527183118No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGACCTTTTTCTGT1940.14869660527183118No Hit
CATAGACCATCCCTTCTACAAGAGGCAAGGAAACATTGGAAAGATGGGGA1900.14563069588478314No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC1900.14563069588478314No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTTCCCCAGGTAGCAAAAC1900.14563069588478314No Hit
CATAGACACACTGACAATTTGCACCTGTATATCTAGGAGTAGAACTGCTG1890.14486421853802112No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGGTGGGTAGAGAGTTCTGTAGAT1880.1440977411912591No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC1870.14333126384449707No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGAAGCAGAGGTAGATGGAT1870.14333126384449707No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT1850.14179830915097305No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1840.14103183180421103No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG1780.13643296772363891No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG1770.13566649037687692No Hit
CATAGAGCAGCATTTCTCTCCAAGGATAGAGCAGCATTCTCTCAGGGCTG1750.13413353568335287No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACAATGCCTCACACACAGGTCT1720.13183410364306683No Hit
CATAGACCACACACACAACTGAGAGTATCCCCAGGTAGCAAAACAGAGTC1720.13183410364306683No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCAACAATGCCTCACACACAGG1690.1295346716027808No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGCTTACACTGCACAT1660.12723523956249475No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACTGTCTTCAGCTCTTTGAGGC1620.12416933017544665No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1580.1211034207883986No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT1570.12033694344163659No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1560.11957046609487457No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGGCAGAGAGTGTGTTGTATTCTA1560.11957046609487457No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT1560.11957046609487457No Hit
CATAGATCACCAGATGCCAGTTGTGCGGAAGACACAGCACACTCTTCTAT1540.11803751140135052No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTACACATAGACCTTTTTCTGTA1530.11727103405458851No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGATAGCGAGAAGAG1500.11497160201430247No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGAGGAGGAGCTGACTTACT1470.11267216997401643No Hit
CATAGATACCTGTCCTCTGCCTCGAGGTCACTGACAGGTCTTAAAGCTCT1420.10883978324020634No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC1420.10883978324020634No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTAGCACTATTCTCTGGCCCGTCT1340.1027079644661102No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1320.10117500977258617No Hit
CATAGATATTCTGCCCCCTCCTCTCCTAGCTTACACTGCACATGGGGTCT1310.10040853242582416No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTGTCTTCAGCTCTTTGAGGCATC1310.10040853242582416No Hit
CATAGAAACAGCAAAGCCCTCCACCACACTGACGGCATTCTCTCAGGGCT1310.10040853242582416No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)