FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806269

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806269
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176051
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA80574.576514759927521No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG62003.5217067781495137No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA61213.4768334175892215No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA51052.899727919750527No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC46752.6554805141691897No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT36352.0647426029957225No Hit
CATAGATCATGGGACTTCAGCATGGCTCACACCTATAATCCCATCTATGA33891.9250103663143066No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA33691.9136500218686632No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG30031.7057557185133854No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT29381.6688345990650437No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG28561.622257186837905No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA27541.5643194301651226No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA25951.474004691822256No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT25451.4456038307081471No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG24521.3927782290359043No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG23761.3496089201424586No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT22621.2848549568022902No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC21691.2320293551300476No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA21141.2007884079045277No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA20891.1865879773474732No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG17280.9815337601036064No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT14180.8054484211961307No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT12870.7310381650771651No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT12320.6997972178516453No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC11440.6498117022908135No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT10930.6208428239544224No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTAGAGACAGGGTTTCACTCTAT10850.6162986861761649No Hit
CATAGAATACAACACACTCTCTGCCCTGTACACGGACTACAAGTACCCAC10280.5839217045060806No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT10270.5833536872837984No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA9880.5612010156147934No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT9880.5612010156147934No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGAACAGCTAAAAATCTTGG9830.5583609295033826No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9780.5555208433919717No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACTACAAGTACCCACCAC9670.5492726539468678No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG9640.5475686022800211No Hit
CATAGACCTGTGTGTGAGGCATTGTTTAGGGTGGGGAAAGAGAGCACTCT9090.5163276550545013No Hit
CATAGATCATGGGACTTCAGCATGGCACAACTGGCATCTGGTGATCTATG8900.5055353278311399No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGACCAAAGCTAGAAACTC8780.49871912116375366No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTACACTGACGACATGGCT8720.4953110178300606No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG8570.4867907594958279No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC8480.48167860449528827No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC8470.48111058727300615No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA8030.4561178294925902No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA8000.4544137778257437No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGCTCACA8000.4544137778257437No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG7940.45100567449205053No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCGTACTCGAGGCAGAGGACAGGT7840.4453255022692288No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC7730.4390773128241248No Hit
CATAGAACATCTACAGAACTCTCTACCCACCTGCCTCTTGTAGAAGGGAT7460.423740847822506No Hit
CATAGAGAACAGCCCTGAGAGAATGCCATAGATGGGACTACAAGTACCCA7420.42146877893337725No Hit
CATAGAGGATCCCCTGACATTTTGGTTGGTAGAGACAGGGTTTCACTCTA7340.41692464115511985No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA7060.40102015893121884No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCACGGACTACAAGTACCCA6710.38113955615134254No Hit
CATAGATCATGGGACTTCAGCATGGCACACGGACTACAAGTACCCACCAC6460.36693912559428804No Hit
CATAGATGATCCATCTACCTCTGCTTCACACGGACTACAAGTACCCACCA6380.3623949878160306No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGACCAAAGCTAGAAACTCCC6140.34876257448125825No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGCTCTTTGAGGCAGGGTGGGGAAAG5850.332290075035075No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATCCTTGGAGAGAAATGC5810.33001800614594634No Hit
CATAGAATACAACACACTCTCTGCCCTGCACTGACGACATGGCTCACACC5790.328881971701382No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA5630.31979369614486713No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG5450.3095693861437879No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA5300.3010491278095552No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA5240.2976410244758621No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA5160.2930968866976047No Hit
CATAGACCCCATGTGCAGTGTAAGCTTGGCTCACACCTATAATCCCATCT5020.28514464558565417No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAAGTTACTATAGACCAAAGCT5020.28514464558565417No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACAGGTGCAAATTGTCAGTGTGT5000.2840086111410898No Hit
CATAGAAGTGACCCTCAGCTCAGTGACCCTCAGTCCAGTGAACTCAAGGG4900.27832843891826803No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCTCTGCCTCTTGTAGAAGGGA4880.27719240447370364No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT4850.27548835280685713No Hit
CATAGACCACCGTGCCCAGATAAGTTACACTGACGACATGGTGGAGGGCT4770.27094421502859967No Hit
CATAGACCCCATGTGCAGTGTAAGCTTAGCACCGCACAACTGGCATCTGG4560.2590158533606739No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC4530.25731180169382734No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA4510.256175767249263No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG4480.25447171558241644No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTACACTGACGACATGGCTCAC4450.25276766391556993No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC4410.2504955950264412No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACATAGAACAGCTAAAAA4290.24367938835905506No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCCTTGGAGAGAAATGCTGCT4230.24027128502536196No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA4230.24027128502536196No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCAGAGGACAGGTATCTATGAG4170.23686318169166887No Hit
CATAGATGCTTCTGATATGTTGCCGTCATAGATGCTCAGATCTCAAAAGG4160.23629516446938673No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACACTGACGACATGGCTCAC4060.2306149922465649No Hit
CATAGAAGGAGCTGGACTGGATGGACTACGGTAGCAAACTAACACAGAAA4040.2294789578020006No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG4010.227774906135154No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA3940.22379878557917876No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGAAGACATGTGTGAGAGGGAA3930.2232307683568966No Hit
CATAGATGCTTCTGATATGTTGCCGTTAGATGCTCAGATCTCAAAAGGCT3710.21073438946668863No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGACGACATGGTTCTAC3600.20448620002158466No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3550.20164611391017379No Hit
CATAGATGATCCATCTACCTCTGCTTCACACTGACGACATGGCTCACACC3540.20107809668789156No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG3410.19369387279822325No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT3380.1919898211313767No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACTGACGACATGGCTCACACC3370.19142180390909452No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGGTTCTACACATAGAGAACAGCT3360.19085378668681233No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT3360.19085378668681233No Hit
CATAGAAGGAGCTGGACTGGATGGACCATGGCTCACACCTATAATCCCAT3320.18858171779768362No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATGTGTAGCCATGGCAAACT3310.18801370057540145No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGAACAGCTAAAAATCTTGGAGCT3260.18517361446399053No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGAGACAGCCGCTCACCTC3260.18517361446399053No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA3250.18460559724170836No Hit
CATAGAGAACAGCCCTGAGAGAATGCACTGACGACATGGCTCACACCTAT3250.18460559724170836No Hit
CATAGAAGGAGCTGGACTGGATGGACTCACATGTGTGAGAGGGAAGGACT3250.18460559724170836No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTGGTCATTCTTCTCTGGGGGCT3240.1840375800194262No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTTAAAGCTAACTTAGCAACCT3190.1811974939080153No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAGTCTAACAGTGAAACAA3170.18006145946345092No Hit
CATAGATGTGGTCTCAGTGCCCTATGAAGAACATTAGCTTAGTTAATTAG3150.17892542501888659No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT3130.17778939057432222No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACACTGACGACATGTGTGAGA3130.17778939057432222No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGGCTCACACCTATAATCCCATC3050.17324525279606479No Hit
CATAGAAGTGACCCTCAGCTCAGTGACTCTCAGTTGTGTGTGTGGTCTAT3000.17040516668465389No Hit
CATAGATGGAAATTTTTGGCCAGGTGCAAATTGTCAGTGTGTCTATGAGA2960.16813309779552518No Hit
CATAGAGAACAGCCCTGAGAGAATGGAGACAGCCGCTCACCTCTATGAGA2870.16302094279498555No Hit
CATAGACTCTGTTTTGCTACCTGGAGACAGCCGCTCACCTCTATGAGACC2810.15961283946129246No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2800.1590448222390103No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCCTTGGAGAGAAATGCTGCTCTA2790.1584768050167281No Hit
CATAGAAGGAGCTGGACTGGATGGAGACAGCCGCTCACCTCTATGAGACC2760.15677275334988158No Hit
CATAGAATACAACACACTCTCTGCCCTGTAACATAGAACAGCTAAAAATC2730.15506870168303502No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACATAGACATGTGTGAG2730.15506870168303502No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGATCGTGCCTCTTGTAGAAGG2710.15393266723847066No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACATCATGTCTATGAGAC2670.15166059834934195No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT2560.14541240890423798No Hit
CATAGACTCTGTTTTGCTACCTAGGGTGGGGAAAGAGAGCACTCTATGAG2560.14541240890423798No Hit
CATAGATGCCTCAAAGAGCTGAAGACACACTGACGACATGGCTCACACCT2510.14257232279282708No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGGAGACAGCCGCTCACC2480.14086827112598055No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGGCTCACACCTA2410.13689215057000528No Hit
CGGACTACAAGTACCCACCACCTCTATGAGACCAAGTCTCTGCTACCGTA2390.13575611612544092No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT2320.13177999556946565No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACACTGACGACATGGCTCA2250.12780387501349041No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGGGAGAGGAGGGGG2230.12666784056892605No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGGTCTCATAGAGGCACAGGGTAAT2220.12609982334664385No Hit
CATAGAAGTGACCCTCAGCACAGTGAAACAAGATCGTGCCTCTATGAGAC2210.1255318061243617No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA2190.12439577167979733No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC2180.12382775445751515No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGCTCACACCTATAATCCCAT2100.11928361667925771No Hit
CATAGATGATCCATCTACCTCTGCTTCACTGACGACATGGCTCACACCTA2060.117011547790129No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGCACAGGGTAATGGAGGAGTA1990.11303542723415375No Hit
CATAGATCGGTAAGGAATTTGGCTCGAGGCAGAGGACAGGTATCTATGAG1930.10962732390046068No Hit
CATAGAATACAACACACTCTCTGCCCTGCGACATGGCTCACACCTATAAT1890.10735525501133195No Hit
CATAGAGAACAGCCCTGAGAGAATGCGGTTCTACACATAGAGAACAGCTA1870.10621922056676758No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTACACTGGAGACAGCCGCTCAC1870.10621922056676758No Hit
CATAGATGATCCATCTACCTCTAACTTCATAGCACATCATGTCTATGAGA1860.1056512033444854No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGACACTTTGGACTCTGCCTCTAT1840.10451516889992103No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1820.1033791344553567No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGCTCACACCT1800.10224310001079233No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)