FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176051
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT78194.441326661024362No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG61823.5114824681484342No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA60713.4484325564751126No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA50222.852582490301106No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA45072.5600536208257836No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT36422.068718723551698No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA33221.8869532124214006No Hit
CATAGATGGGATTATAGGTGTGAGCCATGCTGAAGTCCCATGATCTATGT32791.8625284718632669No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG29521.676786840176994No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT28651.6273693418384445No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG28301.6074887390585682No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA27231.546710896274375No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT25621.4552601234869442No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT24691.4024345218147014No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC24551.394482280702751No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC23921.3586971956989735No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT22441.274630646801211No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC20991.192268149570295No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA20351.1559150473442354No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA20311.1536429784551068No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG16970.9639252262128587No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT13780.7827277323048434No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT12630.7174057517423928No Hit
CATAGACACAGGCCAATCTCAGCAGACCTTTTTCTGTAGTCAAGTGATCT12090.6867328217391552No Hit
CATAGAGTGAAACCCTGTCTCTACCAACAATGCCTCACACACAGGTCTAT10830.6151626517316006No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT10810.6140266172870361No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT10220.5805136011723875No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACAGGGCAGAGAGTGTGTT9900.5623370500593577No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT9820.5577929122811003No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9770.5549528261696894No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT9680.5498406711691498No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGTTTACTCGGAGATTTGAC9650.5481366195023033No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG9410.534504206167531No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTACGATAGCGAGAAGAGTGGAGG9300.5282560167224271No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAAACAATGCCTCACACACAGGTCT9030.5129195517208082No Hit
CATAGATCACCAGATGCCAGTTGTGCCATGCTGAAGTCCCATGATCTATG8600.48849481116267446No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAATCTTTGGGAGGCTAT8560.4862227422735457No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA8550.4856547250512636No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC8490.48224662171757043No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTACTTTTCTAAT8460.4805425700507239No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG8450.4799745528284417No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTCTGTTTACTCGGAGATT8360.4748623978279022No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT8280.4703182600496447No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGGAAACATTG8010.4549817950480258No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT7990.4538457606034615No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT7820.44418946782466445No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG7810.4436214506023823No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC7550.42885300282304556No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACGGTCACTGACAGGTCTTAAAG7510.42658093393391683No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCATCTATGGCATTCTCTCAGGGC7360.41806067559968413No Hit
CATAGAGTGAAACCCTGTCTCTACCAACCAAAATGTCAGGGGATCCTCTA7320.4157886067105555No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT6990.39704403837524355No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGAGGAGAATGATATTGTTGCA6700.3805715389290603No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGGAGGAGAATGATATTGTTGC6410.3640990394828771No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGAAGCAGAGGTAGATGGAT6350.36069093614918407No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTGCCATGCTGAAGTCCCATG6180.351034643370387No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGCCCCAGGTAGCAAAACAGA6020.3419463678138721No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGCCTCAAAGAGCGGAAGACACAGC5910.33569817836876814No Hit
CATAGAGCAGCATTTCTCTCCAAGGATAGAGCAGCATTCTCTCAGGGCTG5890.33456214392420375No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAGGGCAGAGAG5580.3169536100334562No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT5550.3152495583666097No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA5200.2953689555867334No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT5130.29139283503075813No Hit
CATAGACACACTGACAATTTGCACCTGTACGGAAGACACAGCACACTCTT5070.28798473169706507No Hit
CATAGATGGGATTATAGGTGTGAGCCAAGCTTACACTGCACATGGGGTCT5040.2862806800302185No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG5030.28571266280793634No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGTGTAGAACCATGTCGTCA4980.28287257669652544No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGTAACTTAGGAATCTTTGG4910.27889645614055014No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGAGCTGAGGGTCA4840.2749203355845749No Hit
CATAGAAACAGCAAAGCCCTCCACCATGTCGTCAGTGTAACTTATCTGGG4800.27264826669544623No Hit
CATAGACCATCCCTTCTACAAGAGGCAGAGCCTCTAGCCAAATTCCTTAC4790.272080249473164No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT4710.26753611169490654No Hit
CATAGATCACCAGATGCCAGTTGTGCGGTGCTAAGCTTACACTGCACATG4600.26128792224980263No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG4490.25503973280469866No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTAGACCTTTTTC4460.2533356811378521No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA4390.24935956058187683No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT4290.24367938835905506No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCAGCATTCTCTCAGGGCTGTTCT4250.24140731946992633No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTGACAGGTCTT4230.24027128502536196No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATGACGGCAACATATCAGAAG4150.2357271472471045No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTCTGTTTACTCGGAGA4130.2345911128025402No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTTCCCTCTAGCCAAATTCCTTA4010.227774906135154No Hit
CATAGATACCTGTCCTCTGCCTCTAGCCAAATTCCTTACCGATCTATGTG4000.22720688891287186No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT3970.22550283724602527No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA3970.22550283724602527No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA3920.2226627511346144No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACCGTAGTCCATCCAGT3900.22152671669005003No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTCTGTTTACTCG3800.21584654446722826No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTAACGGCAACATATCAGAAGCA3720.2113024066889708No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA3500.19880602779876283No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG3440.1953979244650698No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCAACCAAAATGT3350.19028576946453016No Hit
CATAGAGTCCTTCCCTCTCACACATGTGAGTCCATCCAGTCCAGCTCCTT3290.1868776661308371No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGAAGCAGAGGT3280.1863096489085549No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCCATGGCTACACATAGACC3260.18517361446399053No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG3260.18517361446399053No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT3240.1840375800194262No Hit
CATAGAGGCACGATCTTGTTTCACTGTTAGACTTGGTCTCATAGGGCACT3230.18346956279714402No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCAGCATTC3230.18346956279714402No Hit
CATAGATGGGATTATAGGTGTGAGCCATGGTCCATCCAGTCCAGCTCCTT3230.18346956279714402No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT3160.17949344224116875No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTCATAGGGCACTGAGA3150.17892542501888659No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGCATTCTCTCAGG3130.17778939057432222No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA3130.17778939057432222No Hit
CATAGAGGTGAGCGGCTGTCTCCATACGATAGCGAGAAGAGTGGAGGCTC3130.17778939057432222No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGGCAGAGAGTGTGTTGTATTCT3120.17722137335204002No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAGCTTTAAGACCTTTTTCTGT3110.17665335612975785No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCTTCAGCTCTTTGAGGCATC3110.17665335612975785No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTAGGAATCTTTGGGA3060.17381327001834695No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT3050.17324525279606479No Hit
CATAGACACACTGACAATTTGCACCTGGCCAAAAATTTCCATCTATGTGT3030.17210921835150042No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCTCTCAGGGCTGTTCTCTATGTGT2860.16245292557270338No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2840.16131689112813902No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA2780.15790878779444592No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGTAGCAAAACAGAGTCTATGTGTAG2770.15734077057216375No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTTACAGGGCAGAGAGTGT2750.1562047361275994No Hit
CATAGACCATCCCTTCTACAAGAGGCACGATCTGTTTACTCGGAGATTTG2650.1505245639047776No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG2630.14938852946021322No Hit
CATAGAGGCACGATCTTGTTTCACTGTCATAGGGCACTGAGACCACATCT2540.14427637445967362No Hit
CATAGACATGATGTGCTATGAAGCAGAGGTAGATGGATCATCTATGTGTA2520.14314034001510925No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGTGAGGAGAATGATATT2510.14257232279282708No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGGTAGCAAAACAGAGTCTATGTG2480.14086827112598055No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTCAGGGCAGAGAGTGTGTTGTAT2400.13632413334772311No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGGGAAAGGTAT2370.13462008168087658No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT2340.13291603001403002No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTGTCTTCAGCTC2340.13291603001403002No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGAACCATGTCGTCAGTGT2310.13121197834718348No Hit
CATAGAGGCACGATCTTGTTTCACTGTGCTGAGGGTCACTTCTATGTGTA2210.1255318061243617No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTATGAGACCAGGAGG2190.12439577167979733No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCAGAAGCATCTATGTGTA2170.12325973723523298No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC2160.1226917200129508No Hit
CATAGATGGGATTATAGGTGTGAGCCAGGAAACATTGGAAAGATGGGGAT2160.1226917200129508No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC2150.12212370279066861No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGTTCTGTTTACTC2090.11871559945697555No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCCTCTAGCCAAATTCCTT2050.11644353056784681No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCCCCAGAGGAGAATGATATTGTT2050.11644353056784681No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGTCAGTGAAGCAGAGGTAG1990.11303542723415375No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTAGATGGATCATCTATGTGT1950.11076335834502501No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGGAAACATTGGAAAGATGGGG1920.1090593066781785No Hit
CATAGATACCTGTCCTCTGCCTCGAGCCAAATTCCTTACCGATCTATGTG1890.10735525501133195No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCGCATTCT1840.10451516889992103No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCACTGAGCTGAGGGTCACTTCTAT1810.10281111723307451No Hit
CATAGATGGGATTATAGGTGTGAGCCATGTCGCAGGGCAGAGAGTGTGTT1810.10281111723307451No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG1810.10281111723307451No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)