FastQCFastQC Report
Wed 8 May 2024
EGAF00005806271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences177002
Total Bases26.5 Mbp
Sequences flagged as poor quality0
Sequence length150
%GC40

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2305813.02697144665032No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT156568.845097795505136No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA92545.228189511982915No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA90755.127060711178405No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG70263.96944667291895No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA65813.7180370843267307No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT58193.2875334741980318No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG32901.858736059479554No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC29741.680207003310697No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA29641.6745573496344672No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA29281.6542185964000409No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA26241.4824691246426593No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA24511.3847301160438865No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA23831.3463124710455248No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATAGACCAAAGCTAGAAACTC20291.1463147309069954No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT20241.1434899040688806No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA18391.038971311058632No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT16240.9175037570196948No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG15660.8847357656975627No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG15270.8627021163602672No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA13740.7762624151139536No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACAGCTAAAAATCTTGGA12680.7163760861459193No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT11910.6728737528389509No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG11880.671178856736082No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCATAGAACAGCTAAAAA11020.6225918351205072No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT10970.6197670082823923No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA10700.6045129433565722No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT10510.5937786013717359No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC9830.5553609563733743No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA9710.5485813719618987No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT9590.5418017875504232No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT9380.5299375148303409No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCTAATTAACTTAGCAACCTGTAC9330.5271126879922261No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA9300.5254177918893572No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCAGCAACAAAAGTCA9220.5208980689483735No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA8510.48078552784714296No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG8440.47683077027378223No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGCCTCTTGTAGAAGGGATGGTCT7830.44236788284878137No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGCCTCTTGTAGAAGGG7630.4310685754963221No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG7510.42428899108484647No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCCTGTTCACTCTGATGGTA7430.4197692681438628No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG7340.4146845798352561No Hit
CATAGATGTGGTCTCAGTGCCCTATGATCTCCCTCATTATCCCTGTGCCT7270.41072982226189536No Hit
CATAGACCCCATGTGCAGTGTAAGCTATAGACCACACGCACAACTGGCAT7020.39660568807132124No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG6950.39265093049796046No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG6910.3903910690274686No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTGATTTACTGACATGGGCA6410.3621428006463204No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC6240.35253838939673No Hit
CATAGATGTGCCACATACCTTTCCCATGACACTGACGACATGTGTGAGAG5600.31638060586886024No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCATAGATCTCCCTCATTATCCCT5510.3112959175602536No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT5330.3011265409430402No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA4760.2689235149885312No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT4730.2672286188856623No Hit
CATAGACTCTGTTTTGCTACCTGGGGCATAGAACAGCTAAAAATCTTGGA4260.24067524660738296No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG4140.23389566219590738No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT3920.2214664241082022No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3780.2135569089614807No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC3760.21242697822623471No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT3660.2067773245500051No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGAGACCAA3480.1966079479327917No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA3330.18813346741844725No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3250.18361374447746354No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA2920.1649698873459057No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAACAGAGAAGTCAAGAGGAAA2880.16271002587541383No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG2460.1389814804352493No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2430.13728658433238042No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCACATGTGTGA2370.13389679212664263No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG2250.12711720771516705No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACCTCTAACTTCATAGCACAT2200.12429238087705223No Hit
CATAGAGAATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA2170.12259748477418335No Hit
CATAGACAGCTGGGGTGGGAGGTTAGCAGAGAGATGGGAGCAGGGAGAGG2110.11920769256844556No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1990.11242810815696998No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTCAGTTGTGTGTGTGGTCT1980.11186314278934702No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1910.10790838521598627No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAATCCTTCTATGAG1910.10790838521598627No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC1790.10112880080451069No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)