FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences177002
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2308113.039965650105648No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT153088.648489847572344No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA93535.284121083377589No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT89085.03271149478537No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG71864.059841131738624No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA64303.6327273138156633No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT57313.237816521847211No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG32301.8248381374221758No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA30521.7242743019852884No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA30261.7095852024270912No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC28721.6225805358131549No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGGCAGAGAGTGTGTTGTATTCTA26661.506197670082824No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT24801.4011141117049524No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA23311.3169342719291308No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGGAATCTTTGGGAGGCTAT19691.1124168088496176No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT19521.102812397600027No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA19191.084168540468469No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT17130.9677856747381386No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG15040.8497079129049389No Hit
CATAGATCCCATACTCCTCCATTACCCTACGATAGCGAGAAGAGTGGAGG14910.8423633631258403No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA14270.8062055795979706No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT12330.6966022982791155No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGGAGGAGCTGACTTACT12200.689257748500017No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG11960.6756985796770658No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT11580.6542298957073932No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGAAGTGTATTAATTATC10720.6056428740918182No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT10530.5949085321069818No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA10190.575699709607801No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG10160.5740048135049322No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA9820.5547959910057514No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT9600.542366752918046No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT9540.5389769607123084No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGAGGAGAATGATATTGTTGCA9390.5305024801979639No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC9320.526547722624603No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA8680.4903899390967334No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTAATTAGGAGGAGGAGCTGACT8290.46835628975943777No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG8260.4666613936565689No Hit
CATAGACCATCCCTTCTACAAGAGGCACGGAAGACACAGCACACTCTTCT7850.4434978135840273No Hit
CATAGACCATCCCTTCTACAAGAGGCATAGAGGAGAATGATATTGTTGCA7830.44236788284878137No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC7420.41920430277623977No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCATAGGGCACTGAGACCACAT7340.4146845798352561No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA7330.4141196144676331No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGGTCTATAGCTTACACTGCA7160.40451520321804274No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGATAGCGAGAAGAGTGGAG7090.40056044564468196No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGATAGCGAGAAGAGT6740.38078665777787823No Hit
CATAGACGAATTGCCCATGTCAGTAAATCACACTGAAGCAGAGGTAGATG6410.3621428006463204No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC6120.3457588049852544No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCATGGGAAAGGTAT5700.3220302595450899No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTATGGTCACTGACAGGTCTT5640.3186404673393521No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT5250.2966068180020565No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA4720.26666365351803933No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG4590.2593191037389408No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG4060.2293759392549237No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3940.2225963548434481No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3930.22203138947582512No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3760.21242697822623471No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG3590.20282256697664436No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA3500.19773787866803763No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCTTGGTCTCATAGAGGAGAATG3370.19039332888893912No Hit
CATAGATCACCAGATGCCAGTTGTGCTATGAAGCAGAGGTAGATGGATCA3340.1886984327860702No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT2950.16666478344877458No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA2740.15480051072869233No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2490.1406763765381182No Hit
CATAGAGTCCTTCCCTCTCACACATGTGGTCTCATAGAGGAGAATGATAT2480.14011141117049525No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG2410.1361566535971345No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2320.1310719652885278No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGATAGCGAGAAGAGTGG2220.12542231161229817No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT2040.11525293499508481No Hit
CATAGATATTCTGCCCCCTCCTCTCCCTGCTCCCATCTCTCTGCTAACCT2000.11299307352459294No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA1960.1107332120541011No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1870.1056485237454944No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1790.10112880080451069No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)