FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806276

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806276
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86314
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1058812.266839678383576No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG66087.655768473248836No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG55156.38946173274324No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA48045.5657251430822345No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG46775.418587946335473No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC38444.453506962949231No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG29563.424705146326204No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT26403.0585999953657574No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG20292.3507194661352737No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG18672.163032648237829No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT15731.8224158305720974No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA15411.7853418912343304No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT13471.5605811339991196No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG11901.3786871191232013No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA11481.3300275737423826No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT10651.2338670435850498No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT8691.0067891651412286No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA6980.8086753018050374No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC6970.8075167412007321No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6940.8040410593878164No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC6210.7194661352735362No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT4740.5491577264406702No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG4590.531779317376092No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT4470.5178765901244293No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG4330.5016567416641564No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGCCATGCCTGGCCAACTGTTT4080.4726927265565261No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG4070.471534165952221No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT3600.417081817549876No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT3490.4043376509025187No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3440.39854484788099265No Hit
CATAGAGCAACCCCAGCAGTTTGAGAGGCCGAAGAGGGCCAATTGCTTGA3430.39738628727668746No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGATAGATGCCTGGCCAACTGT3420.3962277266723822No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC3400.3939106054637718No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAACGAATGA3200.3707393933776676No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGTGCTCGTATCTTG3030.351043863104479No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACCTCCTCTATGTGT2920.33829969645712166No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG2820.32671409041406957No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG2770.3209212873925435No Hit
CATAGATCTAGCCCATCACTTCAGCATCATATGAGCATGCCTTTGATAAA2720.3151284843710174No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGATGCCTGGCCAACTGTTTT2600.3012257571193549No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG2540.29427439349352363No Hit
CATAGAGGTGAGCGGCTGTCTCCATGATCTATGTGTAGAACCATGTCGTC2480.28732302986769237No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG2430.2815302268461663No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA2410.2792131056375559No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA2330.2699446208031142No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT2250.2606761359686725No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC2120.2456148481127048No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA2090.24213916629978915No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT2090.24213916629978915No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT2090.24213916629978915No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCAATGAGTCTATGTACA1920.22244363602660056No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC1860.2154922724007693No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG1820.2108580299835484No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC1790.20738234817063278No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG1760.2039066663577172No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1750.20274810575341196No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTAGCCCGTT1710.1981138633361911No Hit
CATAGATGGCAAATGGTGGGATCTCTAGAGACTTGGTCTCATAGATGGCA1650.19116249971035984No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC1590.18421113608452858No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1510.1749426512500869No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCCTGGCCAACTGTTTTTT1450.1679912876242556No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT1450.1679912876242556No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGCATAAAAACTGTCGGAGGTCTA1440.16683272701995042No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTAGAACCATGTCAGCCCGTTCTCT1420.16451560581134No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT1410.16335704520703478No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC1400.16219848460272956No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT1390.16103992399842437No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGACGAATGAGG1350.15640568158120352No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1350.15640568158120352No Hit
CATAGATGGCAAATGGTGGGATCTCTGGTCTCATAGATGGCAAATGATGG1310.15177143916398267No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1300.15061287855967745No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCGCAGGCCCTTCAGCATC1270.14713719674676182No Hit
CATAGATCTAGCCCATCACTTCAGCAGTTGATGTTCGCACCCAAGCTCTA1210.14018583312093055No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA1180.13671015130801492No Hit
CATAGACCAGTTACCACAAGAAGCAATGGAACCTGAATGCACTGCTTTCT1160.13439303009940448No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCCTATGTACGAATGAGG1120.12975878768218366No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTGTTGATGT1090.12628310586926803No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT1080.1251245452649628No Hit
CATAGAGCAGCTTGAATTCTCCTCAGAAAATGGGATTTTCTTTTCTATTG1080.1251245452649628No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACGAAT1020.11817318163913153No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCAACATGCTTTTAG1020.11817318163913153No Hit
CATAGAACACGAAGATTTCAGATTAGCCTACACTGTCATTGTGGGTTTTA1020.11817318163913153No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCTGTTATAGAAAACAAGGAGA1000.11585606043052113No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTTGGTCTCATAGAAATTTTTC990.11469749982621592No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT980.11353893922191069No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG960.11122181801330028No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCATTGTGGGTTTTAACT940.10890469680468985No Hit
CATAGAGCAACAATGAAGGTGCACAATGAGACCATGGAGAGAATAATCCG930.10774613620038465No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG920.10658757559607944No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTCTATACTGTCATTGTGGGT900.104270454387469No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)