FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806281

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806281
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71523
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1804525.22964640744935No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA59868.36933573815416No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG55487.756945318289221No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG45646.381164101058401No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG41925.861051689666262No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA21993.074535464116438No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC17182.4020245235798274No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG17072.386644855501028No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT15592.1797184122589934No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC8591.2010122617899137No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA8241.1520769542664597No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA7651.0695860072983516No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA7511.05001188428897No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT6980.9759098471820253No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA6030.843085441046936No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA5730.8011408917411182No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT5660.7913538302364274No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT5640.788557526949373No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT5550.7759741621576276No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT5370.750807432574137No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA5080.7102610349118466No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3280.4585937390769403No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG2310.3229730296547964No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC2180.304797058288942No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAAACTGCTGGGGTTGCTCTAT2010.28102848034897865No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1950.2726395704878151No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG1800.25166729583490627No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1560.2181116563902521No Hit
CATAGACACAACAGAGAGAACGGGCTCTGTTTCCCCACTCAAATACCATC1420.1985375333808705No Hit
CATAGACCTCCGACAGTTTTTATGCACCGTACTGTCATTGTCGCTGTCCC1420.1985375333808705No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT1360.19014862351970696No Hit
CATAGAAGGACAAAGACATTTAGGACCCGTACACTGACGATCATTGTTCA1300.1817597136585434No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT1270.17756525872796164No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACACGCTATACCACACTACA1200.16777819722327084No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTTGCTGAAGTGATGGGCTA1170.16358374229268904No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG1170.16358374229268904No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCAAGGGGTAAGGCGTACT1130.15799113571858003No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA930.1300281028480349No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC920.12862995120450763No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGTGTCAAGGGGTAAGGCGTACTG890.12443549627392587No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA870.12163919298687136No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCTGCCTCTAAGTAAACTG860.1202410413433441No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCATTGCTTCTTGTGGTAAC830.11604658641276233No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG820.11464843476923507No Hit
CATAGACCAGCAGACACTCCCATCATTCTGCCCTCTCTGCTGTTCCTTCT810.11325028312570783No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT810.11325028312570783No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCTGCCCTCTCTGCTGTTC790.1104539798386533No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCAGGCTAATCTGAAATCTTCG770.10765767655159879No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGTGGCTCAGGTATGTCTTTATTA730.10206506997748976No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG730.10206506997748976No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)