FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences227502
Sequences flagged as poor quality0
Sequence length150
%GC35

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA216199.502773601990313No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC158016.94543344673893No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC156686.886972422220464No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG140576.178846779368972No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG119185.238635264744925No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC102314.497103322168596No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA97924.304137985600127No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA91584.025459116842929No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG86073.7832634438378565No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA70023.077775140438326No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA61482.7023938251092297No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT58172.5569005986760556No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG53532.3529463477244152No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA42701.87690657664548No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT38491.691853258432893No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT29691.3050434721452997No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT28891.269878946119155No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA25511.1213088236586932No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT22460.987244068184016No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG21920.9635080131163681No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC19580.8606517744898946No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT19190.8435090680521489No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG18060.7938391750402195No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG13350.5868080280612917No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC11990.5270283338168456No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACGCTATACCACACTACA10200.4483477068333465No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG8670.38109555080834456No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT8530.37494175875376917No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG8420.3701066364251743No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGCTATACCACACTACA8130.35735949574069675No Hit
CATAGAAAAAACAGTTGGCCAGGCATTGCTTCTTGTGGTAACTGGTCTAT7730.3397772327276244No Hit
CATAGACCAGCAGACACTCCCATCATTCACGCTATACCACACTACACACT7700.33845856300164395No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA7340.32263452628987876No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA7000.3076896027287672No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT6780.2980193580715774No Hit
CATAGAGCTTGGGCGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA6440.2830744345104658No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAATGAGAAACCTGGATGCTTCT5160.2268111928686341No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG4900.21538272191013705No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACACTGCCCTCTCTGCTGTTC4730.20791026012958128No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTCTTCTACAAAGGATTCT4480.19692134574641101No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4410.19384444971912335No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4390.19296533656846973No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT4280.18813021423987483No Hit
CATAGATGTTTTACCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC4110.18065775245931906No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT4090.17977863930866542No Hit
CATAGACGGATTACTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC4090.17977863930866542No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA4090.17977863930866542No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA3960.17406440382941687No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3950.17362484725409005No Hit
CATAGAGCTTTTTTTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3860.1696688380761488No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCAAGTAATAACCAGGCC3640.15999859341895895No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACAAGGGGTAAGGCGTACT3590.1578008105423249No Hit
CATAGACACAACAGAGAGAACGGGCTCCGAGGTCAGGAAGGAACCTGCTC3560.15648214081634448No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT3460.15208657506307635No Hit
CATAGAGAAGACTTCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG3420.15032834876176912No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA3200.1406581041045793No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT3110.136702094926638No Hit
CATAGATGTTTTACCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC3010.1323065291733699No Hit
CATAGACCTCCGACAGTTTTTATGCACGATCATTGTTCACTGCAGCCTCT2920.1283505199954286No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGGCTCAGGTATGTCTTTAT2880.12659229369412137No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2850.12527362396814096No Hit
CATAGAAAAAACAGTTGGCCAGGCATGAGTGTCTGTTTCCCCACTCAAAT2820.12395495424216052No Hit
CATAGACTCATTGCACTTTCCACAACTGTCGTCCCAACTGTCTCTGAAAA2700.11868027533823877No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA2550.11208692670833663No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2500.10988914383170258No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGCCCTCTCTGCTGTTCCT2490.10944958725637575No Hit
CATAGACATTTAATCCTCACAATGACCCATGTCTGCCTCTAAGTAAACTG2390.10505402150310766No Hit
CATAGAAGTCACGAGTTTTGTTGTTCTTCCTTTTCTGCCTTCATCTATGA2380.10461446492778086No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2290.10065845574983956No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)