FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78199
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3205840.995409148454584No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA40725.2072277139093845No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG24843.17651120858323No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG17362.219977237560583No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT11931.5255949564572437No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC10751.3746978861622272No Hit
CATAGACCAAACACAGAAGACATGGCAAATGGTCTATGTGTAGAACCATG9861.260885689075308No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG9421.204618984897505No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG9121.166255322958094No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT7420.9488612386347652No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT6700.8567884499801788No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA6150.7864550697579252No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG4580.5856852389416745No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG4100.5243033798386169No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT4080.5217458023759894No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT3560.45524878834767707No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTTGGCCTCAGTTTCCC3290.42072149260220726No Hit
CATAGAGGGGAGACACTGGCTATAAGAACCATGTCGTCAGTGTAGATTTA2980.3810790419314825No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA2550.3260911264849934No Hit
CATAGATGACCTGTTAATCTGCCCCCTCGCACAACTCTTTCCTGCAGGAT2520.3222547602910523No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG2470.31586081663448384No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT2370.30307292932134683No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG2220.28389109835164134No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA2170.27749715469507286No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC2150.27493957723244544No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC2070.2647092673819358No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC2070.2647092673819358No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA2060.26343047865062214No Hit
CATAGATGATGTGAAAAGGACCCATGGATGATGTGGCATGGAGAAGGGTC1980.25320016880011254No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT1960.2506425913374852No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1950.24936380260617141No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA1920.24552743641223035No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC1920.24552743641223035No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTCTTGGCCTCAGTTTCCCCTC1900.24296985894960293No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTGACTTGGCCTCAGTTTCCCC1810.23146076036777963No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG1760.22506681671121115No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1730.22123045051727006No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1720.21995166178595632No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA1700.21739408432332893No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA1560.19949104208493712No Hit
CATAGACACCTTGTATATGCCAGGACTACACTGATGTGGCATGGAGAAGG1550.19821225335362344No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG1540.19693346462230973No Hit
CATAGATTAGGGGTGACGGACTAGCCTTGCATGAATGTTGGAGAGGCACA1540.19693346462230973No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA1530.19565467589099605No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1510.19309709842836864No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1500.19181830969705496No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1480.18926073223442755No Hit
CATAGATGATGTGAAAAGGACCCATGGTGAGAGAAAACTACCCCAGGCTC1460.18670315477180016No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA1460.18670315477180016No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG1380.17647284492129056No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG1370.17519405618997685No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGCAGAGACTTGGCCTCAGTTTCC1360.17391526745866315No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG1340.17135768999603576No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1310.16752132380209464No Hit
CATAGATGATGTGAAAAGGACCCATGGAGAAGGGTCTATGTGTAGAACCA1260.16112738014552616No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA1240.15856980268289875No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCAGTGTAGCAGA1230.15729101395158507No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA1230.15729101395158507No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1230.15729101395158507No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA1200.15345464775764397No Hit
CATAGACTTACTGCCCTCACTCCGTCTACGGTAGCAAACACTCAAAACAG1130.14450312663844808No Hit
CATAGAGGGGAGACACTGGCTATAAGAACAGAGACTTGGTCTCATAGAGG1120.14322433790713437No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG1090.13938797171319325No Hit
CATAGACTGGCGGTGATTGCTTTCCTTCAGAACGCGGCAAATGGTCTATG1090.13938797171319325No Hit
CATAGACTGGCGGTGATTGCTTTCCTCTATGCCATCAATTTAAGGTAGGC980.1253212956687426No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGG980.1253212956687426No Hit
CATAGATTAGGGGTGACGGACTAGCCAGGAGGAGCAGACTCAGGAGGAGG980.1253212956687426No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG900.11509098581823297No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT890.11381219708691927No Hit
CATAGATGATGTGAAAAGGACCCATGGAAAGCTGTCTGTGTAGGTGATCT850.10869704216166447No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACAACACAGGATCCAGGTGTC830.10613946469903708No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)