FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806293

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806293
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63715
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA881413.83347720317037No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG61199.60370399434984No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG50947.994977634779879No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG41986.588715373146041No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG24893.906458447775249No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC16562.59907400141254No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA14902.338538805618771No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA14182.225535588166052No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT12371.9414580554029663No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC11741.8425802401318372No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG10701.6793533704779096No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA10641.669936435690183No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA10401.6322686965392765No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA10071.5804755552067802No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT9221.4470689790473201No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT9211.4454994899160323No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA9031.4172486855528525No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT8891.395275837714824No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA8211.2885505767872558No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT5960.9354155222475085No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA4400.6905752177666169No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT3780.5932668916267755No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA3700.5807109785764734No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC3550.5571686416071568No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG3360.5273483481126894No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA3070.4818331633053441No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT2830.4441654241544377No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC2820.4425959350231499No Hit
CATAGACCAGCAGACACTCCCATCATTCAGGTGGAAGGGTAAGAGAGGGT2780.4363179784979989No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTGTTTCCCCACTCAAATACCAT2770.4347484893667111No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGCCCTCTCTGCTGTTCCTT2720.4269010437102723No Hit
CATAGACAGTGCCTTTGTGCGTGTTAGGCTAATCTGAAATCTTCGTGTTC2440.3829553480342149No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTACAAGGGGTAAGGCGTACTG2070.3248842501765675No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA1800.2825080436317978No Hit
CATAGACTCATTGCACTTTCCACAACTGTTGAGGAGCTGAGTCATGGGGT1740.2730911088440713No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTGGTGGAAGGGTAAGAGAGGG1730.2715216197127835No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC1690.26524366318763243No Hit
CATAGACGGATTATTCTCTCCATGGTCTGTTTCCCCACTCAAATACCATC1490.23385388056187711No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA1460.22914541316801382No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT1420.22286745664286275No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACGCTGTCCTTCTCTGAATCT1320.20717256532998507No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT1290.20246409793612177No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGGCTCAGGTATGTCTTTAT1280.200894608804834No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGGCTCAGGTATGTCTTT1270.19932511967354627No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA1230.1930471631483952No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGTCATTGTCGCTGTCCC1210.18990818488581965No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT1210.18990818488581965No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC1180.18519971749195635No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC1170.1836302283606686No Hit
CATAGACTCATTGCACTTTCCACAACTGTCAAGGGGTAAGGCGTACTGGT1170.1836302283606686No Hit
CATAGACCAGCAGACACTCCCATCATTCCTGTCATTGTCGCTGTCCCATC1080.16950482617907872No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1080.16950482617907872No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG1060.1663658479165032No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1060.1663658479165032No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGACATGGGTCTACCAG1050.16479635878521542No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGTCATTGTCGCT1050.16479635878521542No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT1050.16479635878521542No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG1050.16479635878521542No Hit
CATAGAGAAGACTCCCTCAACCCACCTGATGCTGAAGTGATGGGCTAGAT1030.1616573805226399No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT1030.1616573805226399No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTCTTACCCTTCCCCACACCCTCT1010.15851840226006436No Hit
CATAGAAAAAACAGTTGGCCAGGCATCAAGGGGTAAGGCGTACTGGTCTA990.1553794239974888No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGGTGCATTACAGAGAGGAGAT970.1522404457349133No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG970.1522404457349133No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGACATGGTTCTACA940.14753197834104997No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG930.1459624892097622No Hit
CATAGAAAAAACAGTTGGCCAGGCATACGCTATACCACACTACACACTCT890.13968453268461117No Hit
CATAGATGGCCAAGATACGAGCACATCTCATTGCTTCTTGTGGTAACTGG870.13654555442203564No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGCTCAGGTA860.13497606529074788No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT840.13183708702817235No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCACTGACGACATGGGTC830.13026759789688455No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTAGGTCTACCAGTTATTAGTTGA810.12712861963430905No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT800.12555913050302125No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACATAGAGATCCCACCATTT790.1239896413717335No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGCTATACCACACTACA760.1192811739778702No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGGCTCAGGTATG760.1192811739778702No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTCTACCA760.1192811739778702No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC750.11771168484658245No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCATGGTTCTACACATAGAGTGTCT730.11457270658400691No Hit
CATAGACCTCCGACAGTTTTTATGCACACACTGACGATCATTGTTCACTG720.11300321745271913No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT710.11143372832143138No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG700.10986423919014361No Hit
CATAGATGGCCAAGATACGAGCACATACACTGGCTCAGGTATGTCTTTAT700.10986423919014361No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGACATGGTCTACCAGT680.10672526092756808No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGAGATCCCACCATTTGC670.10515577179628031No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT650.10201679353370478No Hit
CATAGAGCTTGGGTGCGAACATCAACACACTGACGACATGGTCTACCAGT650.10201679353370478No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)