FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13883
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTGTATACATCTAT142410.257149031189224No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA11538.3051213714615No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA11037.944968666714687No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT9686.972556363898293No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA8376.028956277461644No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT3312.3842109054239No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG2882.074479579341641No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT2701.9448246056327883No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA2681.9304184974429157No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT2351.6927177123100194No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT2281.642296333645466No Hit
CATAGACCCACTTTCGTGACTTTGTGTACGAGCAGGAATTAGACTCTTGA2061.4838291435568682No Hit
CATAGAATCCTTTCCCCATTGCTTGTATGGTTCATCCCATCAACTTTTAT1731.2461283584239717No Hit
CATAGAAGTTCTGATCCACATTCACGTATACGCATCACTTATACGCCTCC1681.2101130879492905No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTTGGAAGTTAGGAAGCCAGCTC1671.2029100338543544No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTACATCACTTATACGCCTCC1541.109270330620183No Hit
CATAGAGCAGAAAACCTTTGAATAACAGACATAGAGCAGGAATTAGACTC1441.0372397896708205No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA1401.0084275732910755No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATCATAGAGCAGGAATTAGACT1380.9940214651012028No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT1350.9724123028163941No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG1280.9219909241518405No Hit
CATAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTCCACATGATGGA1260.9075848159619679No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA1200.8643664913923503No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTATGTGTAGAACCATGTCGTC1050.7563206799683065No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGGAAGT1020.7347115176834977No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA940.6770870849240077No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGATGGGATCTATGTGTAG890.6410718144493265No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT880.6338687603543902No Hit
CATAGACTGTCATTGCTTGCCCATTGGCAGAGACTTGGTCTCATAGACTG780.5618382194050278No Hit
CGTAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA690.4970107325506014No Hit
CGTAGAATCCTTTCCCCATTGCTTGTCTGTGACAGCTTGTATACATCTAT660.4754015702657927No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATCCAGATGATATGAACCCAAAGG660.4754015702657927No Hit
CATAGACCAGACTTTTGAAAGAAGCACATGGAAGTACACAAAAAGGGCAT600.43218324569617517No Hit
CGTAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA600.43218324569617517No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAGGAAAG570.4105740834113665No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG550.3961679752214939No Hit
CATAGATTTAAAATAAAATTCCTGGATAGATCACCCTGCTTATCAAACAT520.37455881293668514No Hit
CGTAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT510.36735575884174887No Hit
CATAGACTGTCATTGCTTGCCCATTGTTTGGAAGTTAGGAAGCCAGCTCT490.3529496506518764No Hit
CATAGACTGTCATTGCTTGCCCATTGACTGTCATTGCTTGCTCATTATTA440.3169343801771951No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTACTG430.3097313260822589No Hit
CATAGACCATCCAGAGGTAATTCTGCTACCGGAGCAGGAATTAGACTCTT410.29532521789238636No Hit
CATAGACTGTCATTGCTTGCCCATTGTCATTGCTTGCTCATTATTATTGG400.2881221637974501No Hit
CGTAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA380.2737160556075776No Hit
CATAGACTGTCATTGCTTGCCCATTGGTCTCATAGACTGTCATTGCTTGC360.25930994741770513No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATGACAGGTGCCCACCAC350.25210689332276887No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG330.23770078513289636No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGTCTGTGACAGCTTGTATACAT310.22329467694302382No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA310.22329467694302382No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTAGAGCAGGAATTAGACTCT300.21609162284808758No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTTAGGTTTGTCAAGGAAAG290.20888856875315134No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAACTCAGATGG280.20168551465821505No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA280.20168551465821505No Hit
CATAGACTGTCATTGCTTGCCCATTGTTGCTTGCTCATTATTATTGGATG250.18007635237340633No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTAGAT250.18007635237340633No Hit
CATAGAATCCTTTCCCCATTGCTTGTGCTCATTATTATTGGATGGGATCT250.18007635237340633No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGAACCATGTCGTCAGTGTGGTT240.1728732982784701No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTCGTTGTATATCT240.1728732982784701No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA230.16567024418353382No Hit
CGTAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT220.15846719008859755No Hit
CATAGAATCCTTTCCCCATTGCTTGTATACATCTATGTGTAGAACCATGT200.14406108189872505No Hit
CGTAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG200.14406108189872505No Hit
CATAGACTGTCATTGCTTGCCCATTGGACTGTCATTGCTTGCTCATTATT200.14406108189872505No Hit
CATAGACTGTCATTGCTTGCCCATTGTTATTGGATGCTCATTATTATTGG190.1368580278037888No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATCTTGCTCATTATTATTGGAT190.1368580278037888No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT180.12965497370885257No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTCTATGTTGGAAGTTAGGAA180.12965497370885257No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATTGCTCATTATTATTGGATGG170.1224519196139163No Hit
CGTAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA160.11524886551898006No Hit
CATAGAGTTCAAATGGCCAATCAGGTTCCACATGATTGGCCAATCAGCTT160.11524886551898006No Hit
CGTAGACCCACTTTCGTGACTTTGTGTACGAGCAGGAATTAGACTCTTGA150.10804581142404379No Hit
CGTAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT150.10804581142404379No Hit
CATAGAATAGCCAGCTTCCACATGATGGACATCTATGTGTAGAACCATGT140.10084275732910752No Hit
CATAGACTGTCATTGCTTGCTCATTATTATTGGATGGGATCTATGTGTAG140.10084275732910752No Hit
CATAGAATCCTTTCCCCATTGCTTGTCCATGGTTTGGAAGTTAGGAAGCC140.10084275732910752No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT140.10084275732910752No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)