FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69483
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC54627.860915619647972No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA52037.488162572139948No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA44786.444741879308608No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC34174.917749665385778No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA20622.967632370507894No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT17972.586244117266094No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA15112.1746326439560755No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT13942.0062461321474316No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG13741.9774621130348429No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA11881.7097707352877682No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA10921.5716074435473424No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT10421.4996473957658707No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG10261.4766201804757997No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC10111.4550321661413583No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC8801.2664968409539024No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG8141.1715095778823597No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA8051.1585567692816947No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG7951.1441647597254003No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC7741.1139415396571823No Hit
CATAGATGCACCAGAAGCCACCTACCAAGTATATGACACATTACACCAGT7731.112502338701553No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT7031.0117582718074924No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG6360.9153318077803204No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT6250.8995005972683967No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC5960.857763769555143No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA5150.7411884921491587No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG4790.689377257746499No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGATAGTCACTCAAATATAGACC4630.6663500424564283No Hit
CATAGAGACCCCCAAGTAGCCTAACTGAGGTTCTTCAACACAGCTATTCT4530.6519580329001339No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA4510.649079630988875No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT4330.6231740137875452No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA4230.6087820042312508No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGGAAAATGTCAGTGGGCCATCT4090.5886331908524387No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCTCTTACCCCTTTACCTACCTT4030.5799979851186622No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA3990.5742411812961444No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC3770.5425787602722968No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA3650.5253083488047436No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG3630.5224299468934848No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAGCTCTCTTCCGCCTTTATC3530.5080379373371904No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA3520.5065987363815609No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT3460.49796353064778437No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG3330.4792539182246017No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA3160.45478750197890133No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGATCTAGCTTCGGAATGTT3100.4461522962451247No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA2930.4216858799994243No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA2840.4087330713987594No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG2820.40585466948750054No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTAACAAGCACATTATTATT2800.40297626757624166No Hit
CATAGATCATGAATGACTCCCACTCTGGTGAAAAGTAGGGGACAGTTCTA2790.4015370666206122No Hit
CATAGATGCACCAGAAGCCACCTACCAGCATGAGAAGAATGGCCTCTATG2690.3871450570643179No Hit
CATAGACAGTATGGGGGAAACGGCTCTATGACCAGCATGAGAAGAATGGC2510.36123943986298807No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT2500.3598002389073586No Hit
CATAGATCATGGGACTTCAGCATGGCTCTCTTCCGCCTTTATCCTTCTAT2370.341090626484176No Hit
CATAGATCATGGGACTTCAGCATGGCTAATACCATCGGCCGCACTGAAAT2300.33101621979477No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT2270.32669861692788166No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2270.32669861692788166No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT2250.3238202150166228No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA2240.32238101406099334No Hit
CATAGAGCATCCTCGTAATAGCAAACATTACACTGACGACAAGGTTTTCC2190.3151850092828462No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTTGCCAAGATTGTAGGAGTAG2100.30223220068218126No Hit
CATAGATGTCCCCATTCATCCTGCAACCGGAACAAGGGCATGGTCAAGTG2010.2892793920815164No Hit
CATAGACAGTCCTGCCGTGTACATGTGAGGTTCTTCAACACAGCTATTCT1960.2820833873033692No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTACGCTGACATCCCAACCACA1850.2662521767914454No Hit
CATAGATCATGAATGACTCCCACTCTGACACTGACGACAAGGTTTTCCGG1830.26337377488018654No Hit
CATAGACCCCCATGCAACCACATCTATGTGCCAAGTATATGACACATTAC1830.26337377488018654No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA1710.2461033634126333No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA1630.23458975576759783No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTAAGGAAAATGTCAGTGGGCCATC1520.21875854525567404No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA1440.20724493761063856No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGAAAAGTAGGGGACAGTTCTAT1350.19429212900997367No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG1340.19285292805434423No Hit
CATAGAGTCATTCCAAACTGTGCACTTCATTCCAACTCTATAGATTATGC1250.1799001194536793No Hit
CATAGATCATGAATGACTCCCACTCTGAGGTTCTTCAACACAGCTATTCT1230.17702171754242044No Hit
CATAGAAGGGCAATTATCTCATCCTAGACCTTTTAGCTATTAAGATGTTG1230.17702171754242044No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG1220.175582516586791No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGTACAAACCAAACAATAGCCAGT1200.17270411467553212No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT1170.16838651180864386No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA1160.16694731085301442No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT1120.16119050703049667No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT1100.1583121051192378No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA1090.15687290416360838No Hit
CATAGACCATGTAATACCATCGTGAGCAGACACTGACGACATGGTTCTAC1070.1539945022523495No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTACAATGGGCACACTTAA1040.1496768993854612No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTCTAGGGCAAGT1020.14679849747420232No Hit
CATAGAATTGCCTACTTTGGGACCCAGCTCTCTTCCGCCTTTATCCTTCT990.14248089460731403No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA980.1410416936516846No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA980.1410416936516846No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC980.1410416936516846No Hit
CATAGAATTGCCTACTTTGGGACCCATGCTCTCTTCCGCCTTTATCCTTC980.1410416936516846No Hit
CATAGAATTGCCTACTTTGGGACCCACCCGTAATCCCTCCCTTTTCTATG970.13960249269605515No Hit
CATAGACCTGGTACTTCTCTTCTGGGTGTACAGCCTACATCCCTCATCTA960.13816329174042571No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCCCAGGGAACACGGTGGTGGTGG930.13384568887353743No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATTCGTCAGTGTGGGAGGAACAG910.13096728696227855No Hit
CATAGACAGTATGGGGGAAACGGCTCGTCAGTGTAGCCTTCTCTGATACC910.13096728696227855No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT910.13096728696227855No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTACCACAGCCCAGTTTTCC900.1295280860066491No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTGTGATTGTCCTGGTCTATGA870.1252104831397608No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGATGCAAACAGAATGGGAC840.1208928802728725No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTTCAACAC810.1165752774059842No Hit
CATAGAATTGCCTACTTTGGGACCCATTGACCTTTTAGCTATTAAGATGT790.11369687549472533No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT790.11369687549472533No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC780.1122576745390959No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA770.11081847358346646No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT760.10937927262783702No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAGCATGAGAAGAATGGCCTCTAT750.1079400716722076No Hit
CATAGATCTGCTCACCTAAATTTCGTTCAGTGTGTGTACAGCCTACATCC740.10650087071657816No Hit
CATAGACCTGGTACTTCTCTTCTGGGTGTTCCAACTCTATAGATTATGCT730.10506166976094872No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT710.10218326784968985No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)