FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences272400
Sequences flagged as poor quality0
Sequence length150
%GC33

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT3052311.205212922173274No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG180806.6372980910425845No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG167036.131791483113069No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG137255.038546255506608No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA106183.8979441997063144No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC103653.8050660792951545No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG102783.7731277533039647No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG76092.7933186490455215No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC70762.5976505139500734No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA67522.4787077826725405No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT62522.2951541850220263No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC57282.1027900146842877No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG55772.0473568281938324No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA51601.8942731277533038No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT50081.8384728340675478No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT33621.234214390602056No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC30841.13215859030837No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT30521.120411160058737No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC28661.052129221732746No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG25950.9526431718061674No Hit
CATAGAACACGAAGATTTCAGATTAGCCTTCCTTTCAATAGCCTTTTAGG25360.9309838472834068No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG23890.8770190895741556No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG23450.8608663729809105No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG22410.8226872246696035No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT20980.7701908957415565No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT20910.7676211453744493No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT19530.7169603524229076No Hit
CATAGACCAGTACGCCTTACCCCTTGTATGCTTTATTCTCACGTGGATCT19310.7088839941262849No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT17630.6472099853157122No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG17480.6417033773861968No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT16730.6141703377386197No Hit
CATAGACCAGTACGCCTTACCCCTTGCTGAATGATGGGAGTGTCTGCTGG15700.5763582966226138No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT15460.5675477239353892No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC15300.5616740088105727No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT15220.5587371512481645No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA13510.49596182085168866No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG12890.473201174743025No Hit
CATAGAACATTGATTCCTGGCATGTCCTTCCTTTCAATAGCCTTTTAGGT12670.46512481644640236No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT12230.44897209985315706No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG11840.434654919236417No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT10630.3902349486049927No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG10350.3799559471365639No Hit
CATAGACCAGTACGCCTTACCCCTTGATAGACCAACATGCTTTTAGTCAC9640.3538913362701909No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG8850.3248898678414097No Hit
CATAGACCAGTACGCCTTACCCCTTGTTGTCTTTATGGTGTCCTCATCTA7760.28487518355359764No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGTCCTAAATGTCTTT7310.2683553597650514No Hit
CATAGATCTAGCCCATCACTTCAGCATGGGTCATTGTGAGGATTAAATGT6870.2522026431718062No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT5780.21218795888399414No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT5720.20998531571218798No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA5290.19419970631424377No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG5220.19162995594713658No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGTAAGAGAACCCTGGGAGAAGAAA4950.1817180616740088No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTATGGTGGGTTGAGGGAGTCTTCT4950.1817180616740088No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG4580.16813509544787078No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTATGTGCTCGTAT4460.16372980910425844No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA4260.1563876651982379No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT4140.15198237885462554No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCAGGGTCCTAAATGTCTT3950.145007342143906No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT3950.145007342143906No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA3880.14243759177679882No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCATTGTGGGTTTTAACT3840.14096916299559473No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGGACAGTTGTGGAAAGTGCAA3800.1395007342143906No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG3780.13876651982378854No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG3690.1354625550660793No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT3630.13325991189427314No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT3460.12701908957415564No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT3440.12628487518355358No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC3380.12408223201174744No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG3210.11784140969162997No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGCCTGGCCAACTGT3170.11637298091042585No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCAGACCCAGGCTACACA3100.11380323054331866No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA3000.11013215859030838No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA2940.10792951541850221No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGGCAGGCCCTTC2930.10756240822320118No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGCAGGCCCTTCAGCATCA2910.10682819383259913No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGACCCTGGGAGAAGAAATGTT2850.10462555066079295No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)