FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806320

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806320
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100682
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2186421.715897578514532No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT97739.70679962654695No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG63256.282155698138695No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG52495.213444309807116No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG46144.582745674499911No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC38443.8179615025525915No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG25742.5565642319381814No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG23272.311237361196639No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT18311.818597167318885No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG17281.7162948689934645No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT13131.3041059970997795No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT12601.251465008641068No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA11601.1521423889076499No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA9640.9574700542301504No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT8500.8442422677340538No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC8380.8323235533660436No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC8360.8303371009713753No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA7610.7558451361713117No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT7390.7339941598299596No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG6800.675393814187243No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC6480.6436105758725492No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6250.6207663733338631No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG6030.5989153969925111No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT5490.5452811823364654No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT5450.5413082775471286No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGAGCATGCCTTTGAT4620.4588705031683916No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG3800.3774259549869887No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG3790.37643272878965456No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG3790.37643272878965456No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3560.3535885262509684No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA3330.33074432371228224No Hit
CATAGATGGGACAGCGACAATGACAGTGTAGCCCGTTCTCTCTGTTGTGT2890.28704237102957825No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC2780.2761168828589023No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT2680.2661846208855605No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA2660.2641981684908921No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT2540.25227945412288194No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2520.25029300172821356No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTCTGAGAAAAGATGC2380.23638783496553506No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG2140.2125504062295147No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTATGAGCAT2100.208577501440178No Hit
CATAGACCTCCCATGGTTCCTGATGAGAGACTTGGTCTCATAGACCTCCC2070.20559782284817543No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACCAGAGACAGTTGTGGAAAGTG1900.18871297749349436No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1880.186726525098826No Hit
CATAGATGGGACAGCGACAATGACAGTACACATAGATGCCTGGCCAACTG1870.18573329890149182No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTAAACCATGTCGTCAGT1850.18374684650682346No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1820.18076716791482092No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG1780.1767942631254842No Hit
CATAGAGGCTGCAGTGAACAATGATCGCACCACTGCATTCTAGCCTGGGG1720.1708349059414791No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGAGCCTACAGTTGTGGAAAGTGCA1690.16785522734947658No Hit
CATAGAACATTGATTCCTGGCATGTCCTTGCCCAGCTCATCTGCTTCTCT1680.1668620011521424No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACCTCCTCTATGTGC1650.16388232256013985No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT1570.1559365129814664No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT1560.15494328678413222No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAACCCTGGGAGAAGAAATGT1530.15196360819212967No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG1480.14699747720545878No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGACAGTTGTGGAAAGTGCAAT1420.1410381200214537No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG1410.1400448938241195No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC1400.1390516676267853No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGC1400.1390516676267853No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACCTCCTCTATGTGT1290.12812617945610932No Hit
CATAGATGCCACCACACCCAGTTAATTTGTGTAGTTTTAGCAGAGACAGG1280.12713295325877516No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG1280.12713295325877516No Hit
CATAGATGCCACCACACCCAGTTAATTTTTTGTGCATAATACTTCTCTAA1250.12415327466677262No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGCTAATAAAGACATGCCTGG1230.12216682227210425No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGGCAGGCCCTTC1230.12216682227210425No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA1220.12117359607477006No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGGCAGGCCCTTCAG1210.12018036987743588No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG1200.11918714368010169No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGAGTCTTTCCCTGAAGAGGGGTCT1140.11322778649609662No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAGCAGGCC1120.11124133410142827No Hit
CATAGATGGTATTTGAGTGGGGAAACAGAGAGAACTGGCTTGATTGCACC1110.11024810790409409No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCGCAG1080.10726842931209153No Hit
CATAGAAGTATTCACACTGGGGCCCAGGTAAAGGCTGGGGTCTTGGGTCT1040.1032955245227548No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT1040.1032955245227548No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1040.1032955245227548No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGGGCACCAGGCTTTAGCCTCCCT1010.10031584593075227No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)