FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806321

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806321
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40406
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1981349.0347968123546No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAATAGCCAGGACTA13633.373261396822254No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCCTCCCAAGTAGCCAGGACTA12062.984705241795773No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGGAGGTCTATGAG8872.1952185319012028No Hit
CATAGAGCTTCTGATCACTTTCGCCCCACCCTTATGATCGTATCTATGAG6651.6457951789338219No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAAGTTTTTCCAAATATAA5821.4403801415631343No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCAGATTTGGACCTGCGAGCGGGTTC5191.2844627035588774No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCTG4981.2324902242241251No Hit
CATAGAACCAGAGTAATGAGGGATGCTCAGGTCTCCAATGGTGTCTATGA4891.2102163045092313No Hit
CATAGAACTTGTAATCATTCCCTACTTCCCACACTCATGCAAAGCTGGTC3840.9503539078354699No Hit
CATAGAACCAGAGTAATGAGGGATGCTCTCTCCAGAACCCACCATCTATG3400.8414591892293224No Hit
CATAGATGTGGCTATGCAGACTGAGCAGAGTTGGGTGTGTCTATGAGACC3170.784536949957927No Hit
CATAGAAGGAGGGGAAACTGAGGCCACACTGACGACATGGTTCTACACAT2430.6013958323021333No Hit
CATAGATCATGCAAAGAACACAGGCCACACTCATGCAAAGCTGGTCTATG2430.6013958323021333No Hit
CATAGACTCAAGCAATCCTCCCACCTCAGCTTCCCTAAGTACCAGGATTA2100.5197247933475226No Hit
CATAGAAGATCCCATAGCAGCTTTGCTACCGTAGTTTTTCCAAATATAAG1830.45290303420284117No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTAGGTAGAGGAGTTTCAAACATCT1590.39350591496312426No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGACGCCGTGGCTCACACCTGTAAT1330.32915903578676436No Hit
CATAGATGTGGCTATGCAGACTGAGTAGAGTTGGGTGTGTCTATGAGACC1230.30441023610354895No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGCAGAGGTTGCAGTGAGCTGAGA1110.27471167648369055No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1100.272236796515369No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAAATAGTTTTTCCAAATATAA1050.2598623966737613No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTTCT1020.25243775676879676No Hit
CATAGATGTGGCTATGCAGACGGAGTGAGGGCAGTAAGTCTATGAGACCA970.24006335692718903No Hit
CATAGAACTTTGTGCCCCCAGTGTCTTCTTATAGCCAGTGTCTCCCCTCT910.22521407711725983No Hit
CATAGATCATGCAAAGAACACAGGCAGATCATGAGGTCAGGTCTATGAGA890.22026431718061676No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGAAAGCAATCACCGCCA890.22026431718061676No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG820.20294015740236598No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG810.20046527743404446No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG770.1905657575607583No Hit
CATAGAGTCTCGCTAATAGTTTTACCTCAAACATAAGCAAATGGGCTTTG770.1905657575607583No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGCTTGCAGATTTGGACCTGCG750.18561599762411524No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG720.17819135771915062No Hit
CATAGAAGAATTGCTTGAATCCGGGAGGTGGAGGTTGCAGTGAGCCAAGA710.1757164777508291No Hit
CATAGAAGGAGGGGAAACTGAGGCCACTGCCAGGCCCACAGATACTGTGC690.170766717814186No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG680.16829183784586446No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTTCTTATAGCCAGTGTCT670.16581695787754294No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG630.15591743800425678No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG590.14601791813097065No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTCTCGC580.14354303816264913No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG580.14354303816264913No Hit
CATAGATCACCTACACAGACAGCTTTCCCATGGGTCCTTTTCACATCATC570.14106815819432758No Hit
CATAGAGGGCTGTTTTGAGTGTTTGCCGTGGAGGGAAGGAAGGGCAAACT560.13859327822600603No Hit
CATAGAGAGGTCGCCCAGGTATTTCTTAGGTAGAGGAGTTTCAAACATCT550.1361183982576845No Hit
CATAGATCATGCAAAGAACACAGGCCGGGTGCAGTGGTTCACGCCTGTAA550.1361183982576845No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTCTATGAGACCAAGTTCTTA540.13364351828936297No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG540.13364351828936297No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCTCTGCTGGAGGGAAGGAAGG530.13116863832104142No Hit
CATAGATGTGGCTATGCAGACTGAGTGAGGGCAGTAAGTCTATGAGACCA530.13116863832104142No Hit
CATAGAACACAGATCTGCTTGGAGGGAAGGAAGGGCAAACTCTATGAGAC520.1286937583527199No Hit
CATAGATCATGGGACTTCAGCATGGTGGTGTTTGCAGATTTGGACCTGCG500.12374399841607682No Hit
CATAGATCATGGGACTTCAGCATGGCAGTGTTTGCAGATTTGGACCTGCG490.12126911844775529No Hit
CATAGAAGGAGGGGAAACTGAGGCCAGGCACAGTGGCTCACGCCTGTAAT480.11879423847943374No Hit
CATAGAACTTTGTGCCCCCAGTGTCTCCCCTTCTTATAGCCAGTGTCTCC470.11631935851111222No Hit
CATAGACTCAAGCAATCCTCCCACCTTGACCTCTCAAAGTGCTAGGATTA450.11136959857446914No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGGGAGGGAAGGAAGGGCAAACTC440.10889471860614759No Hit
CATAGACCCTTCTCCATGCCACATCATCTATGAGCCTTTCAGCATCTCTT440.10889471860614759No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGTAGATTTGGACCTGCG430.10641983863782607No Hit
CATAGATCATGGGACTTCAGCATGGCCATGGGTCCTTTTCACATCATCTA430.10641983863782607No Hit
CATAGACCCTTCTCCATGCCACATCACCATTCACCAAGTCACCCAGCCTC430.10641983863782607No Hit
CATAGAAGGAGGGGAAACTGAGGCCAAGTCAGGGATTATCAGTAGTGCTC420.10394495866950453No Hit
CATAGATGTGGCTATGCAGACTGAGTCTCTGCTACCGTAGGAGGGAAGGA420.10394495866950453No Hit
CATAGACCATTTGCCGCGTTCTGAAGGAGGGAAGGAAGGGCAAACTCTAT410.10147007870118299No Hit
CATAGATCATGGGACCTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG410.10147007870118299No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)