FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40406
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1994049.349106568331436No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA24926.167400881057269No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG8982.22244221155274No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG7141.767064297381577No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT5871.4527545414047418No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT4961.227540464287482No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC3670.9082809483740039No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG3240.8018611097361779No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG3090.7647379102113547No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG2370.5865465524922041No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC2320.5741721526505965No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA2140.5296243132208088No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG1860.46032767410780573No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG1790.44300351432955504No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT1530.37865663515319503No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG1180.2920358362619413No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG1160.28708607632529826No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTTTGAGGTAAAAC1050.2598623966737613No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG990.24501311686383212No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA980.24253823689551057No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG900.22273919714893828No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT890.22026431718061676No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA890.22026431718061676No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT870.21531455724397366No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC830.2054150373706875No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA810.20046527743404446No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA760.18809087759243676No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA750.18561599762411524No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA740.1831411176557937No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA740.1831411176557937No Hit
CATAGACTTACTGCCCTCACTCCGTCACCCAGGCTGGAGTCCAGTAGCGT730.18066623768747217No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGTAGAGCCTTCAGGTCA720.17819135771915062No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA710.1757164777508291No Hit
CATAGACACCATTGGAGACCTGAGCACCTTCCACTCCAAAGCACAGTATC710.1757164777508291No Hit
CATAGAAAGGCAATGTTCAAGTGGTTTTCTTACAAAATAATATTCTCCAA680.16829183784586446No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT660.1633420779092214No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA630.15591743800425678No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC630.15591743800425678No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG630.15591743800425678No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA600.1484927980992922No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA580.14354303816264913No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCGGCCTCCCAAAGTGCTGGG550.1361183982576845No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA550.1361183982576845No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC540.13364351828936297No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA540.13364351828936297No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT530.13116863832104142No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGAAATACCTGGGCGACCTCTCT520.1286937583527199No Hit
CATAGATGATGTGAAAAGGACCCATGGGAAAGCTGTCTGTGTAGGTGATC510.12621887838439838No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGCAGAGACTTGGCCTCAGTTTCC510.12621887838439838No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA490.12126911844775529No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA490.12126911844775529No Hit
CATAGATACGATCATAAGGGTGGGGCATGGAGGCTCACACCTGTAATCCT480.11879423847943374No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA470.11631935851111222No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA460.11384447854279067No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA450.11136959857446914No Hit
CATAGATGATGTGAAAAGGACCCATGGCCATGCTGAAGTCCCATGATCTA450.11136959857446914No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC440.10889471860614759No Hit
CATAGAGCCAAAGAGATGCTGAAAGGCTCATAGATGATGTGGCATGGAGA430.10641983863782607No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGTGCAGAGCCTTCAGGTCA430.10641983863782607No Hit
CATAGACCTCCTTTCCTCCACGGCAAAGCTGCTATGGGATCTTCTATGTG420.10394495866950453No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTACGGTAGACACTGGGGGCA420.10394495866950453No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTACGGTAGCAGAGACTCAGTCTGC410.10147007870118299No Hit
CATAGAGGCTGGGTGACTTGGTGAATGGTGATGTGGCATGGAGAAGGGTC410.10147007870118299No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACAACACAGGATCCAGGTGTC410.10147007870118299No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)