FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806328

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806328
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23624
Sequences flagged as poor quality0
Sequence length150
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA975941.30968506603454No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT11344.8002031832035215No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG8813.7292583813071456No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG5042.133423636979343No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA3681.5577378936674569No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG3111.3164578394852693No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2761.1683034202505926No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG2541.0751777853030817No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT2170.9185573992549949No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT1850.7831019302404334No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT1780.7534710463934982No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG1520.6434134778191669No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT1520.6434134778191669No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG1510.6391804944124618No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGAGGTTTCCTGGGC1300.550287842871656No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAAGCTTTGAGAT1250.5291229258381307No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA1160.4910260751777853No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT1130.47832712495767016No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG1130.47832712495767016No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA1100.465628174737555No Hit
CATAGACTCACTCTGTCACCCAAGCTACACTGAAACATTTTCTGGTCAGC1080.4571622079241449No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA990.4190653572637995No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA960.4063664070436844No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGAGGCAAGGGTAC920.3894344734168642No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT910.3852014900101592No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC880.37250253979004405No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC810.3428716559431087No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC800.3386386725364037No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGTAGCAGAAGCTTTGAGATTTGTG790.3344056891296986No Hit
CATAGATCTCAAACAGCCTCTCCCAGGTAAACAAACTTCTGGCCCTCTAT780.33017270572299356No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCACATGGTGCCATACCAAGAATAA750.31747375550287843No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG660.279376904842533No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC600.25397900440230275No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCTTCAGGGTAATTCTGGCC570.24128005418218762No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGATCACATTTATCGGGAG550.2328140873687775No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTGTGCCATACCAAGAATAAG550.2328140873687775No Hit
CATAGAGGTGAGCGGCTGTCTCCACTTGGTCTCATAGAGGTAAACAAACT530.22434812055536743No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA530.22434812055536743No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG520.22011513714866238No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT520.22011513714866238No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA500.21164917033525227No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA490.20741618692854724No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTCAGGAAAGTTGGAA490.20741618692854724No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGTCTGTGACACCGAAAAACACCCT470.19895022011513713No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGTGTGTGCCATACCAAGAAT470.19895022011513713No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA450.19048425330172705No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA450.19048425330172705No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGAAGCTTTGAGATTTGTGTCT450.19048425330172705No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA440.18625126989502203No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA430.18201828648831697No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG420.17778530308161192No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT420.17778530308161192No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCTCTATGTGTAGGTGCCATACCAA420.17778530308161192No Hit
CATAGAACCAACCCTGATTCTGCTGGAGACCCCATATCTACCAAAGATCT410.17355231967490686No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA400.16931933626820184No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCATGTCGTCAGTGTACCAAAA400.16931933626820184No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA400.16931933626820184No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA380.16085336945479173No Hit
CATAGACTCACTCTGTCACCCAAGCTACGGTAGCGGAGACCCCATATCTA370.15662038604808667No Hit
CATAGATCCCTGGCAAGAATTCCTCATTCTATAGAGGCAAGGGTACTATT370.15662038604808667No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC360.15238740264138165No Hit
CATAGATAGCAGCAATCTCAGGCCTCCCAGAGACAGGTGGTGGCTTCTCA360.15238740264138165No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT340.14392143582797157No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC340.14392143582797157No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA340.14392143582797157No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA340.14392143582797157No Hit
CATAGACGGGAAGAGTAAGACCACCCACACTGTGCAAAATTCTCTTGACA310.13122248560785643No Hit
CATAGAACAATCAGGCACCCACCATGAGGAGGCTGAGAAGAATCTCCTTT290.12275651879444632No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG280.11852353538774128No Hit
CATAGAACCAACCCTGATTCTGCTGGAGGCTGAAACTCTAAGGGTCTATG280.11852353538774128No Hit
CATAGATAGCAGCAATCTCAGGCCTCTATAGGTAAACAAACTTCTGGCCC260.11005756857433119No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC260.11005756857433119No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC250.10582458516762613No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGCTGCTGCTCACTCTTTGGG250.10582458516762613No Hit
CATAGATCCAGCTTCATCCATGTCCCACACTGAAACATTTTCTGGTCAGC240.1015916017609211No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGCGCCTTCAGGTCA240.1015916017609211No Hit
CATAGACTCACTCTGTCACCCAAGCTAGCAGTGCAACCCCACCGGTCCCC240.1015916017609211No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)