FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806329

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806329
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159994
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1680410.502893858519695No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG89695.605835218820706No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC75014.688300811280423No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG73994.6245484205657705No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA51853.2407465279948No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG51203.200120004500169No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA49563.0976161606060226No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT42862.6788504568921336No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG34082.130079877995425No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA33502.0938285185694463No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA32282.017575659087216No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA29241.8275685338200183No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC22641.4150530644899184No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA21471.3419253221995826No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG20991.3119241971573934No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC20631.2894233533757515No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT19891.24317161893571No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT18681.1675437828918585No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT16601.0375389077090391No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA16151.0094128529819868No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT14260.8912834231283673No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC14120.8825330949910621No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA11820.7387777041639062No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG11460.7162768603822643No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT11410.7131517431903697No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT10980.6862757353400752No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC10730.6706501493806017No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA10350.6468992587222021No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG9010.5631461179794242No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG8400.525019688238309No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG8270.5168943835393828No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC8130.5081440554020776No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA8070.504393914771804No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTGTTTCCCCACTCAAATACCAT7920.49501856319611987No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA7620.47626786004475163No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG7470.46689250846906766No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTTGGAGACAGCCGCTCACCTC7170.4481418053176994No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA6940.4337662662349838No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGATCATTGTTCACT6930.4331412427966049No Hit
CATAGACCAACATTTCTTCTCCCAGGGTAGAAATCTACAAAGGATTCTGG6070.37938922709601614No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG6030.37688913334250035No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT5900.36876382864357415No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGTCTTCTACGCTATACCACACTA5640.3525132192457217No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA5640.3525132192457217No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGGCTCAGGTATGTCTTT5350.3343875395327325No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGGTGGAAGGGTAAGAGAG5170.32313711764191155No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGACATGGTTCTACA5100.318761953573259No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGCCCTCTCTGCTGTTCCTT4970.3106366488743328No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCCAACTGTCTCTGAAAA4740.2962611097916172No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGTTCTACAAAGGATTCTGGGC4660.29126092228458567No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT4640.2900108754078278No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT4560.28501068790079626No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT4530.28313561758565947No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGAGATCCCACCATTTGC4460.2787604535170069No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGCTATACCACACTAC4390.2743852894483543No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC4250.2656349613110492No Hit
CATAGAGAAGACTCCCTCAACCCACCGTATTGCATGACAGAGCGAGACTT4030.2518844456667125No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA3990.24938435191319674No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGCTATACCACACTAC3950.24688425815968099No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGAACATTGCTTCTTGTGGTAACTG3930.2456342112829231No Hit
CATAGATGGCCAAGATACGAGCACATCACTGACGCTATACCACACTACAC3820.23875895346075476No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG3790.23688388314561798No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG3790.23688388314561798No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTCGATCATTGTTCACTGC3640.22750853156993386No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC3610.22563346125479708No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT3510.21938322687100764No Hit
CATAGATCACGTAGAAACTGGAGAGGGAGAGGCTAATCTGAAATCTTCGT3470.2168831331174919No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC3380.21125792217208147No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTGGTGGAAGGGTAAGAGAG3370.21063289873370253No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGATCATTGTTCACTG3290.20563271122667098No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA3230.20188257059639736No Hit
CATAGAGTGCCTGTTTCCTCATTCGTTAGAGCAGCATAATTTCCCATGTC3120.19500731277422903No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT3030.1893821018288186No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAATTAGCG2990.1868820080753028No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2960.185006937760166No Hit
CATAGACACAACAGAGAGAACGGGCTGAGTGTCTGTTTCCCCACTCAAAT2870.17938172681475553No Hit
CATAGACCCAGATGCTGTCCCACTAAGACCCACGCTGTCCTTCTCTGAAT2860.1787567033763766No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC2830.1768816330612398No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCAAGGGGTAAGGCGTACT2820.17625660962286085No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGATCATTGTTCACTG2810.1756315861844819No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGACACTGACGCTATACCACA2810.1756315861844819No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2770.17313149243096618No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGCCCTCTCTGCTGTTCC2750.17188144555420828No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2570.16063102366338738No Hit
CATAGACATTTAATCCTCACAATGACCCATACTGACGCTATACCACACTA2340.14625548458067178No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2300.14375539082715602No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT2290.14313036738877707No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT2270.1418803205120192No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGACGATCATTGTTCA2270.1418803205120192No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC2220.1387552033201245No Hit
CATAGACATTTAATCCTCACAATGACCCATGTCATCTACAAGGGGTAAGG2120.13250496893633512No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGACATGGTTCTACACAT2080.13000487518281936No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT2020.1262547345525457No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGCTATACCACACTACA1970.12312961736065102No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGCCCTCTCTGCTGTTCCTT1920.12000450016875633No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1890.11812942985361952No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA1860.1162543595384827No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1850.11562933610010376No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACATGACGCTATACCACACTAC1830.11437928922334588No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATCATCAGGAACCA1810.11312924234658799No Hit
CATAGATCACGTAGAAACTGGAGAGGCAGAGGTTGCAGTGAGCCGAGATC1780.11125417203145117No Hit
CATAGATGTTTTATCAAAGGCATGCTCATAGGACATGCCAGGAATCAATG1760.1100041251546933No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1740.10875407827793543No Hit
CATAGACTCATTGCACTTTCCACAACTGTCAGAGATCCCACCATTTGCCA1740.10875407827793543No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTATGCAGAAGTAGGAAGTA1730.10812905483955648No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACACACTGACGACATGGGT1720.10750403140117755No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGATCATTGT1690.10562896108604074No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG1650.10312886733252496No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGACATGGTTCTACAAA1640.10250384389414602No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)