FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806330

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806330
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159994
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1662410.390389639611486No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG88255.515831843694138No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG73874.617048139305224No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG71324.457667162518594No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA51443.215120567021263No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG50853.178244184156906No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC48323.0201132542470344No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT41792.6119729489855867No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG33492.0932034951310676No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA33382.086328237308899No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT31201.9500731277422905No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA28791.799442479092966No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC22861.4288035801342551No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT21611.3506756503368875No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG21191.324424665924972No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC20281.2675475330324888No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG18741.171293923522132No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT18211.1381676812880483No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT16251.0156630873657762No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT15600.9750365638711452No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT14070.8794079777991675No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC13940.8712826731002413No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT13020.8137805167693789No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG11680.7300273760266011No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT11490.7181519306974011No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA11270.7044014150530644No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT10910.6819005712714227No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT10870.679400477517907No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG10750.6719001962573596No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT10040.627523532132455No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG8800.5500206257734664No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC8140.5087690788404565No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG8020.5012687975799093No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT7890.493143492880983No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGCTGGTGTTTTCCTT7720.48251809442854104No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCAACATGCTTTTAGTCACGT7720.48251809442854104No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT7550.4718926959760991No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG7460.4662674850306887No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG7290.4556420865782467No Hit
CATAGAGGTGAGCGGCTGTCTCCAACACTGTCAGACCCAGGCTACACATC7120.4450166881258047No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA6860.4287660787279523No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC6740.42126579746740506No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTACCCTGGGAGAAGAAATG6070.37938922709601614No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG5820.36376364113654264No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT5690.3556383364376164No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGAAGACTCACTCTCCCACCATT5500.34376289110841657No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGTCCTAAATGTCTTT5420.33876270360138505No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTACCCTGGGAGAAGAAA5330.3331374926559746No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGACGAATGAGGAAACAGGC5110.31938697701163793No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTAGCCCGTTCTCTCTGTTGTGT4820.3012612972986487No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACATGAGCATGCCTTTGATAAAA4570.2856357113391752No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG4480.2800105003937648No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGTTAATATAGAAGAGACACA4440.277510406640249No Hit
CATAGATGGCAAATGGTGGGATCTCTACACTGTCATTGTGGGTTTTAACT4290.2681350550645649No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGGGTCCTAAATGTCTTTG4230.2643849144342913No Hit
CATAGAGCAACCCCAGCAGTTTGAGAGGCCGAAGAGGGCCAATTGCTTGA4140.25875970348888083No Hit
CATAGACCAGTTACCACAAGAAGCAATGTTCACGAATGAGGAAACAGGCA3940.24625923472130204No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCAACATGCTTTTAGT3880.24250909409102842No Hit
CATAGAAGTCTCGCTCTGTCATGCAATACGGTGGGTTGAGGGAGTCTTCT3870.24188407065264947No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGATGTGCTCGTATCTTGGC3710.23188369563858646No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG3700.23125867220020752No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG3690.23063364876182857No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT3550.22188332062452343No Hit
CATAGAGGCTGCAGTGAACAATGATCGACACTGACCAACATGCTTTTAGT3490.2181331799942498No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT3400.2125079690488393No Hit
CATAGACCCTCTCTTACCCTTCCACCACACTGTCATTGTGGGTTTTAACT3370.21063289873370253No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG3360.21000787529532358No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCCTCTCCAGTTTCTACGT3310.20688275810342888No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGGGGTCCTAAATGTCTTT3270.2043826643499131No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC3200.20000750028126058No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG3160.1975074065277448No Hit
CATAGATGACATGGGAAATTATGCTGCTCTAACGAATGAGGAAACAGGCA3010.1881320549520607No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGAGCATGCCTTTGAT2920.18250684400665027No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCAACATGCTTTTAG2870.17938172681475553No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCTTAGTGGGACAGCATCTGGGT2860.1787567033763766No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG2850.17813167993799767No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCAGCCCGTTCTCTCTGT2820.17625660962286085No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGTGGGTTGAGGGAGT2790.17438153930772404No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT2780.1737565158693451No Hit
CATAGACCAGTACGCCTTACCCCTTGACACTGACGAATGAGGAAACAGGC2770.17313149243096618No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTCAATGAGCATGCCTTTG2770.17313149243096618No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTTGTTACAAAAATTGGGAAGCG2710.16938135180069253No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA2480.15500581271797692No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT2280.14250534395039813No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG2270.1418803205120192No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG2230.13938022675850345No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGTCTGAGAAAAGATGC2220.1387552033201245No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTATGGGTCATTGTGAGGATT2200.1375051564433666No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC2140.133755015813093No Hit
CATAGACCAGTACGCCTTACCCCTTGTAGATGACATGGGTCATTGTGAGG2110.13187994549795617No Hit
CATAGAAGCATCCAGGTTTCTCATTTGTCAGACCCAGGCTACACATCTAT2010.1256297111141668No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC1990.1243796642374089No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCAGGCCCTTCAGCATC1960.12250459392227207No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGCAGGCCCTTCAGCATCATTT1960.12250459392227207No Hit
CATAGAACATTGATTCCTGGCATGTCCTATGAGCATGCCTTTGATAAAAC1790.11187919546983012No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG1760.1100041251546933No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1750.10937910171631435No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGACTGTTAATATAGAA1740.10875407827793543No Hit
CATAGATGGCAAATGGTGGGATCTCTGACAGTTGTGGAAAGTGCAATGAG1720.10750403140117755No Hit
CATAGAAGTCTCGCTCTGTCATGCAAGCTGGAGTGCAATAGCGCGATCTC1720.10750403140117755No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCATGTACCCTGGGAGAAGAAATG1700.10625398452441966No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATACGGTAGCAGGCCCTTCAG1700.10625398452441966No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA1700.10625398452441966No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTGTT1670.10437891420928284No Hit
CATAGACCTCCCATGGTTCCTGATGATAGACCTCCCATGATTTACCATCA1660.10375389077090391No Hit
CATAGATGCCACCACACCCAGTTAATTTTGTCTTTTTAGTAGAGATGGGA1600.10000375014063029No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)